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title: Nextflow | ||
menu: | ||
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parent: Interop | ||
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# Nextflow | ||
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[Nextflow](https://nextflow.io/) is a workflow engine with a [rich ecosystem]() of pipelines centered around biological analysis. | ||
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> Nextflow enables scalable and reproducible scientific workflows using software containers. It allows the adaptation of pipelines written in the most common scripting languages. | ||
> Its fluent DSL simplifies the implementation and the deployment of complex parallel and reactive workflows on clouds and clusters. | ||
Since Nextflow [includes support](https://www.nextflow.io/docs/latest/executor.html#ga4gh-tes) for the TES API, it can be used in conjunction with Funnel to run tasks or to interact with a common TES endpoint. | ||
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## Getting Started | ||
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To set up Nextflow to use Funnel as the TES executor, run the following: | ||
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``` | ||
funnel server run | ||
``` | ||
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## Additional Resources | ||
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- [Nextflow Homepage](https://nextflow.io/) | ||
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- [Nextflow Documentation](https://www.nextflow.io/docs) | ||
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- [Nextflow's TES Support](https://www.nextflow.io/docs/latest/executor.html#ga4gh-tes) | ||
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- [nf-core](https://nf-co.re/) | ||
> A community effort to collect a curated set of analysis pipelines built using Nextflow. | ||
- [nf-canary](https://github.com/seqeralabs/nf-canary) | ||
> A minimal Nextflow workflow for testing infrastructure. |