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Run ruff format #20

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Run ruff format

Run ruff format #20

Triggered via push January 30, 2025 14:59
@oerc0122oerc0122
pushed 2acbfd6
run-ruff-format
Status Failure
Total duration 21s
Artifacts –

lint.yml

on: push
lint_format_ruff
5s
lint_format_ruff
lint_check_ruff
5s
lint_check_ruff
lint-mdanse-gui
10s
lint-mdanse-gui
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16 errors
lint_format_ruff: MDANSE/Src/MDANSE/Chemistry/ChemicalSystem.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Framework/Configurators/GroupingLevelConfigurator.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Framework/Jobs/SolventAccessibleSurface.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/MolecularDynamics/Configuration.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/MolecularDynamics/TrajectoryUtils.py#L1
Would reformat
lint_format_ruff
The process '/opt/hostedtoolcache/ruff/0.9.3/x86_64/ruff' failed with exit code 1
Ruff (F821): MDANSE/Src/MDANSE/Chemistry/Databases.py#L641
MDANSE/Src/MDANSE/Chemistry/Databases.py:641:27: F821 Undefined name `nucleotide`
Ruff (F821): MDANSE/Src/MDANSE/Chemistry/Databases.py#L641
MDANSE/Src/MDANSE/Chemistry/Databases.py:641:41: F821 Undefined name `nucleotide`
Ruff (F821): MDANSE/Src/MDANSE/Framework/AtomSelector/selector.py#L81
MDANSE/Src/MDANSE/Framework/AtomSelector/selector.py:81:19: F821 Undefined name `select_methyl`
Ruff (F821): MDANSE/Src/MDANSE/Framework/AtomSelector/selector.py#L101
MDANSE/Src/MDANSE/Framework/AtomSelector/selector.py:101:36: F821 Undefined name `Trajectory`
Ruff (E722): MDANSE/Src/MDANSE/Framework/Configurators/UnitCellConfigurator.py#L116
MDANSE/Src/MDANSE/Framework/Configurators/UnitCellConfigurator.py:116:13: E722 Do not use bare `except`
Ruff (F841): MDANSE/Src/MDANSE/Framework/Converters/ASE.py#L190
MDANSE/Src/MDANSE/Framework/Converters/ASE.py:190:17: F841 Local variable `realConf` is assigned to but never used
Ruff (F821): MDANSE/Src/MDANSE/Framework/Converters/ASE.py#L203
MDANSE/Src/MDANSE/Framework/Converters/ASE.py:203:17: F821 Undefined name `real_conf`
Ruff (F821): MDANSE/Src/MDANSE/Framework/Converters/ASE.py#L313
MDANSE/Src/MDANSE/Framework/Converters/ASE.py:313:27: F821 Undefined name `element_count`
Ruff (F821): MDANSE/Src/MDANSE/Framework/Converters/ASE.py#L314
MDANSE/Src/MDANSE/Framework/Converters/ASE.py:314:17: F821 Undefined name `element_count`
Ruff (F821): MDANSE/Src/MDANSE/Framework/Converters/ASE.py#L316
MDANSE/Src/MDANSE/Framework/Converters/ASE.py:316:17: F821 Undefined name `element_count`