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Fix ruff errors #19

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Fix ruff errors

Fix ruff errors #19

Triggered via push January 30, 2025 14:58
@oerc0122oerc0122
pushed 28db251
add-ruff
Status Failure
Total duration 26s
Artifacts –

lint.yml

on: push
lint_format_ruff
8s
lint_format_ruff
lint_check_ruff
8s
lint_check_ruff
lint-mdanse-gui
13s
lint-mdanse-gui
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20 errors
lint_format_ruff: MDANSE/Src/MDANSE/Chemistry/ChemicalSystem.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Chemistry/Databases.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Core/Platform.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Core/Singleton.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Core/SubclassFactory.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Framework/AtomMapping/atom_mapping.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Framework/AtomSelector/all_selector.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Framework/AtomSelector/atom_selectors.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Framework/AtomSelector/group_selectors.py#L1
Would reformat
lint_format_ruff: MDANSE/Src/MDANSE/Framework/AtomSelector/molecule_selectors.py#L1
Would reformat
Ruff (F821): MDANSE/Src/MDANSE/Framework/AtomSelector/selector.py#L70
MDANSE/Src/MDANSE/Framework/AtomSelector/selector.py:70:19: F821 Undefined name `select_methyl`
Ruff (F821): MDANSE/Src/MDANSE/Framework/AtomSelector/selector.py#L90
MDANSE/Src/MDANSE/Framework/AtomSelector/selector.py:90:36: F821 Undefined name `Trajectory`
Ruff (E722): MDANSE/Src/MDANSE/Framework/Configurators/UnitCellConfigurator.py#L116
MDANSE/Src/MDANSE/Framework/Configurators/UnitCellConfigurator.py:116:13: E722 Do not use bare `except`
Ruff (F821): MDANSE/Src/MDANSE/Framework/Jobs/DistanceHistogram.py#L145
MDANSE/Src/MDANSE/Framework/Jobs/DistanceHistogram.py:145:30: F821 Undefined name `find_index_groups`
Ruff (F821): MDANSE/Src/MDANSE/Framework/Jobs/DistanceHistogram.py#L190
MDANSE/Src/MDANSE/Framework/Jobs/DistanceHistogram.py:190:9: F821 Undefined name `van_hove_distinct`
Ruff (F821): MDANSE/Src/MDANSE/Framework/Jobs/RigidBodyTrajectory.py#L193
MDANSE/Src/MDANSE/Framework/Jobs/RigidBodyTrajectory.py:193:13: F821 Undefined name `center_of_mass`
Ruff (F821): MDANSE/Src/MDANSE/Framework/Jobs/TrajectoryEditor.py#L148
MDANSE/Src/MDANSE/Framework/Jobs/TrajectoryEditor.py:148:33: F821 Undefined name `MoleculeTester`
Ruff (F821): MDANSE/Src/MDANSE/Framework/Jobs/TrajectoryEditor.py#L156
MDANSE/Src/MDANSE/Framework/Jobs/TrajectoryEditor.py:156:39: F821 Undefined name `brute_formula`
Ruff (F821): MDANSE/Src/MDANSE/MolecularDynamics/Trajectory.py#L1015
MDANSE/Src/MDANSE/MolecularDynamics/Trajectory.py:1015:32: F821 Undefined name `Atom`
Ruff (F821): MDANSE/Src/MDANSE/Trajectory/MdanseTrajectory.py#L79
MDANSE/Src/MDANSE/Trajectory/MdanseTrajectory.py:79:13: F821 Undefined name `file_object`