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25.0.0 Release Candidate 1

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@mgxd mgxd released this 24 Jan 20:17
· 5 commits to master since this release
25.0.0rc1
68ab1f6

Release Notes

A release candidate for a new minor version with improvements to anatomical to template spatial normalization.

Registration will now prioritize the same modality as the anatomical template, if available.

A new flag --norm-csf performs normalization on the lower bound of CSF values prior to template registration.

A new flag --multi-step-reg adds an intermediate step when registering to MNI152NLin6Asym, first performing anatomical -> MNIInfant:cohort-X (age matched by default), and then concatenates the transform with an already computed MNIInfant -> MNI152NLin6Asym.

Both of these flags are experimental and disabled unless requested, but comparisons and feedback with your data are helpful for future determinations!

Changes

  • ENH: Output anatomical coregistration transform + report (#437)
  • ENH: Minimize clipping prior to surface reconstruction with MCRIBS (#436)
  • ENH: Output fsLR meshes on subject surfaces (#427)
  • ENH: Add flag for multi-step registration to adult templates (#415) (#425) (#430) (#433)
  • ENH: Option to normalize CSF prior to template registration (#419)
  • ENH: Expand template registration to use either anatomical modality (#418)
  • FIX: Reduce range that --surface-recon-method auto recommends MCRIBS (#438)
  • FIX: Allow T2 only without the use of --derivatives
  • FIX: New styling catches (#417)
  • FIX: Default surface recon method should be None (#416)
  • TST: Build workflow across different conditions (#409)
  • MAINT: Remove deprecated parser arguments (#407)
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