Code

Implement AROMA classifier#18

Code

Merged

tsalo merged 35 commits intonipreps:mainnipreps/fmripost-aroma:mainfrom tsalo:internal-aromaCopy head branch name to clipboardMay 15, 2024

+2,115-408

Commits

Commits on May 4, 2024

• Add code and files from ME-ICA/aroma.

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• Update.

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• More work.

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Commits on May 5, 2024

• Work on separate denoising.

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• Keep working.

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  69c0b54

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• Update aroma.py

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• Update reportlets.py

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• Update outputs.rst

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Commits on May 6, 2024

• Keep working.

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• Update base.py

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Commits on May 7, 2024

• Merge branch 'main' into internal-aroma

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  6ab4077

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• Update confounds.py

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• Update utils.py

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• Directly use fMRIPrep confounds.

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• Whoops!

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  33dadcd

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• Update aroma.py

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  4db1c79

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• Update aroma.py

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• Remove aroma.py.

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• Merge remote-tracking branch 'upstream/main' into internal-aroma

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  29d61b9

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• Run ruff fix.

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  b39f054

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• Address ruff's concerns.

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• Keep fixing.

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  5558de3

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• Add mock config for tests.

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Commits on May 8, 2024

• Modify Dockerfile.

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• Update env.yml

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• More docker updates.

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• Update.

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• Keep working

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Commits on May 9, 2024

• Keep working.

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  42b0a82

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• More work.

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  666a169

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• Fix some style issues.

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Commits on May 11, 2024

• Try to implement tests.

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• Patch in output and working directories.

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  06a6a25

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• Merge branch 'main' into internal-aroma

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Commits on May 14, 2024

• Improve denoising slightly.

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