Update AMDbox environs

builds/lscamd50/gnu13.env

@@ -0,0 +1,5 @@
+module load gcc/13.2.0
+module load hdf5/1.14.3
+module load netcdf/4.9.2
+module load mpich/4.1.2
+which mpif90

builds/lscamd50/gnu13.mk

@@ -0,0 +1,182 @@
+# $Id: gnu.mk,v 1.1.2.1.4.1.2.1.2.1 2012/11/30 16:53:18 Seth.Underwood Exp $
+# template for the GNU fortran compiler
+# typical use with mkmf
+# mkmf -t gnu.mk -c"-Duse_libMPI -Duse_netCDF" path_names /usr/local/include
+############
+# commands #
+############
+FC = gfortran
+CC = gcc
+CXX = g++
+LD = gfortran $(MAIN_PROGRAM)
+
+#########
+# flags #
+#########
+DEBUG =
+REPRO =
+VERBOSE =
+OPENMP =
+
+MAKEFLAGS += --jobs=$(shell grep '^processor' /proc/cpuinfo | wc -l)
+
+# Macro for Fortran preprocessor
+FPPFLAGS = $(INCLUDES)
+# Fortran Compiler flags for the NetCDF library
+#FPPFLAGS += -I/opt/netcdf/4.9.2/GCC/13.1.0/include
+
+FFLAGS := -fcray-pointer -fdefault-double-8 -fdefault-real-8 -Waliasing -ffree-line-length-none -fno-range-check
+#FFLAGS += -I$(shell nc-config --includedir)
+FFLAGS += $(shell pkg-config --cflags-only-I netcdf)
+FFLAGS += $(shell pkg-config --cflags-only-I mpich)
+FFLAGS_OPT = -O3 
+FFLAGS_REPRO = -O2 -fbounds-check
+FFLAGS_DEBUG = -O0 -g -W -fbounds-check -fbacktrace
+FFLAGS_OPENMP = -fopenmp
+FFLAGS_VERBOSE = 
+
+CFLAGS := -D__IFC 
+CFLAGS += $(FPPFLAGS)
+CFLAGS += $(shell pkg-config --cflags-only-I netcdf)
+CFLAGS += $(shell pkg-config --cflags-only-I mpich)
+CFLAGS_OPT = -O2
+CFLAGS_OPENMP = -fopenmp
+CFLAGS_DEBUG = -O0 -g 
+
+# Optional Testing compile flags.  Mutually exclusive from DEBUG, REPRO, and OPT
+# *_TEST will match the production if no new option(s) is(are) to be tested.
+FFLAGS_TEST = -O2
+CFLAGS_TEST = -O2
+
+LDFLAGS :=
+LDFLAGS_OPENMP := -fopenmp
+LDFLAGS_VERBOSE := 
+
+ifneq ($(REPRO),)
+CFLAGS += $(CFLAGS_REPRO)
+FFLAGS += $(FFLAGS_REPRO)
+else ifneq ($(DEBUG),)
+CFLAGS += $(CFLAGS_DEBUG)
+FFLAGS += $(FFLAGS_DEBUG)
+else ifneq ($(TEST),)
+CFLAGS += $(CFLAGS_TEST)
+FFLAGS += $(FFLAGS_TEST)
+else
+CFLAGS += $(CFLAGS_OPT)
+FFLAGS += $(FFLAGS_OPT)
+endif
+
+ifneq ($(OPENMP),)
+CFLAGS += $(CFLAGS_OPENMP)
+FFLAGS += $(FFLAGS_OPENMP)
+LDFLAGS += $(LDFLAGS_OPENMP)
+endif
+
+ifneq ($(VERBOSE),)
+CFLAGS += $(CFLAGS_VERBOSE)
+FFLAGS += $(FFLAGS_VERBOSE)
+LDFLAGS += $(LDFLAGS_VERBOSE)
+endif
+
+ifeq ($(NETCDF),3)
+  # add the use_LARGEFILE cppdef
+  ifneq ($(findstring -Duse_netCDF,$(CPPDEFS)),)
+    CPPDEFS += -Duse_LARGEFILE
+  endif
+endif
+
+LIBS := $(shell pkg-config --libs-only-L netcdf) $(shell pkg-config --libs-only-L mpich)
+LIBS += -L/opt/netcdf/4.9.2/GCC/13.1.0/lib64 -L/opt/mpich/4.1.2/GNU/13.1.0/lib 
+LIBS += -lnetcdff -lnetcdf -lz -lmpi -lfmpich 
+#LIBS += -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -lmpich -lfmpich
+LDFLAGS += $(LIBS)
+
+#---------------------------------------------------------------------------
+# you should never need to change any lines below.
+
+# see the MIPSPro F90 manual for more details on some of the file extensions
+# discussed here.
+# this makefile template recognizes fortran sourcefiles with extensions
+# .f, .f90, .F, .F90. Given a sourcefile <file>.<ext>, where <ext> is one of
+# the above, this provides a number of default actions:
+
+# make <file>.opt	create an optimization report
+# make <file>.o		create an object file
+# make <file>.s		create an assembly listing
+# make <file>.x		create an executable file, assuming standalone
+#			source
+# make <file>.i		create a preprocessed file (for .F)
+# make <file>.i90	create a preprocessed file (for .F90)
+
+# The macro TMPFILES is provided to slate files like the above for removal.
+
+RM = rm -f
+SHELL = /bin/csh -f
+TMPFILES = .*.m *.B *.L *.i *.i90 *.l *.s *.mod *.opt
+
+.SUFFIXES: .F .F90 .H .L .T .f .f90 .h .i .i90 .l .o .s .opt .x
+
+.f.L:
+	$(FC) $(FFLAGS) -c -listing $*.f
+.f.opt:
+	$(FC) $(FFLAGS) -c -opt_report_level max -opt_report_phase all -opt_report_file $*.opt $*.f
+.f.l:
+	$(FC) $(FFLAGS) -c $(LIST) $*.f
+.f.T:
+	$(FC) $(FFLAGS) -c -cif $*.f
+.f.o:
+	$(FC) $(FFLAGS) -c $*.f
+.f.s:
+	$(FC) $(FFLAGS) -S $*.f
+.f.x:
+	$(FC) $(FFLAGS) -o $*.x $*.f *.o $(LDFLAGS)
+.f90.L:
+	$(FC) $(FFLAGS) -c -listing $*.f90
+.f90.opt:
+	$(FC) $(FFLAGS) -c -opt_report_level max -opt_report_phase all -opt_report_file $*.opt $*.f90
+.f90.l:
+	$(FC) $(FFLAGS) -c $(LIST) $*.f90
+.f90.T:
+	$(FC) $(FFLAGS) -c -cif $*.f90
+.f90.o:
+	$(FC) $(FFLAGS) -c $*.f90
+.f90.s:
+	$(FC) $(FFLAGS) -c -S $*.f90
+.f90.x:
+	$(FC) $(FFLAGS) -o $*.x $*.f90 *.o $(LDFLAGS)
+.F.L:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c -listing $*.F
+.F.opt:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c -opt_report_level max -opt_report_phase all -opt_report_file $*.opt $*.F
+.F.l:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c $(LIST) $*.F
+.F.T:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c -cif $*.F
+.F.f:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) -EP $*.F > $*.f
+.F.i:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) -P $*.F
+.F.o:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c $*.F
+.F.s:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c -S $*.F
+.F.x:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -o $*.x $*.F *.o $(LDFLAGS)
+.F90.L:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c -listing $*.F90
+.F90.opt:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c -opt_report_level max -opt_report_phase all -opt_report_file $*.opt $*.F90
+.F90.l:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c $(LIST) $*.F90
+.F90.T:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c -cif $*.F90
+.F90.f90:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) -EP $*.F90 > $*.f90
+.F90.i90:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) -P $*.F90
+.F90.o:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c $*.F90
+.F90.s:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -c -S $*.F90
+.F90.x:
+	$(FC) $(CPPDEFS) $(FPPFLAGS) $(FFLAGS) -o $*.x $*.F90 *.o $(LDFLAGS)

builds/lscamd50/intel24.env

@@ -0,0 +1,4 @@
+module load oneapi/2024.0 
+module load compiler/2024.0.0
+module load hdf5/1.14.3    libyaml/0.2.5    mpich/4.1.2 netcdf/4.9.2 
+which mpif90