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Co-authored-by: Felix Lenner <[email protected]>
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ramprasadn and fellen31 authored Sep 13, 2024
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2 changes: 1 addition & 1 deletion CHANGELOG.md
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Expand Up @@ -14,7 +14,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- A new parameter `scatter_count` to control how many interval files are created from a genome (used to parallelize annotations) [#585](https://github.com/nf-core/raredisease/pull/585)
- Print warning messages if user intends to perform ranking when there are no affected samples [#579](https://github.com/nf-core/raredisease/pull/579)
- Two new parameters `skip_repeat_annotation` and `skip_repeat_calling` to skip calling and annotation of repeat expansions [#574](https://github.com/nf-core/raredisease/pull/574)
- A new parameter `skip_smncopynumbercaller` to skip smncopynumbercaller module[#574](https://github.com/nf-core/raredisease/pull/574)
- A new parameter `skip_smncopynumbercaller` to skip smncopynumbercaller module [#574](https://github.com/nf-core/raredisease/pull/574)
- A new parameter `skip_sv_calling` to skip sv calling workflow [#572](https://github.com/nf-core/raredisease/pull/572)
- Two new parameters `skip_snv_calling` and `skip_repeat_analysis` to skip snv calling and repeat analysis respectively [#571](https://github.com/nf-core/raredisease/pull/571)
- Two new parameters `mbuffer_mem` and `samtools_sort_threads` to control resources given to mbuffer and samtools sort in the bwameme module [#570](https://github.com/nf-core/raredisease/pull/570)
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