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Remove dumps
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nschcolnicov committed Dec 26, 2024
1 parent cc042d0 commit 9c37367
Showing 1 changed file with 0 additions and 7 deletions.
7 changes: 0 additions & 7 deletions workflows/differentialabundance.nf
Original file line number Diff line number Diff line change
Expand Up @@ -317,11 +317,6 @@ workflow DIFFERENTIALABUNDANCE {
ch_matrices_for_validation = ch_in_raw
}


ch_input.join(ch_matrices_for_validation).dump(tag:"VALIDATOR_ch_input")
ch_features.dump(tag:"VALIDATOR_ch_features")
ch_contrasts_file.dump(tag:"VALIDATOR_ch_contrasts_file")

VALIDATOR(
ch_input.join(ch_matrices_for_validation),
ch_features,
Expand Down Expand Up @@ -574,8 +569,6 @@ workflow DIFFERENTIALABUNDANCE {
)

// Differential analysis using the results of DESeq2
ch_differential.dump(tag:"PLOT_DIFFERENTIAL_ch_differential")
ch_all_matrices.dump(tag:"PLOT_DIFFERENTIAL_ch_all_matrices")

PLOT_DIFFERENTIAL(
ch_differential,
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