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Update CHANGELOG.md
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FriederikeHanssen authored Jan 12, 2022
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## v1.2.0 - Anna Winlock

- [#36](https://github.com/qbic-pipelines/bamtofastq/pull/36) Add options `--cram_files` and `--reference_fasta` to add support for CRAM files.

- [#31](https://github.com/qbic-pipelines/bamtofastq/pull/31) Add option `--samtools_collate_fast` and improve speed of cat.
- [#32](https://github.com/qbic-pipelines/bamtofastq/pull/32) Added `--samtools_collate_fast` to sortExtractMapped and changed cat command to append.
- [#33](https://github.com/qbic-pipelines/bamtofastq/pull/33) Added flag `--reads_in_memory` to specify how many reads shall be stored in memory.
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