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add updio and automap to wes profile (#248)
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* add updio and automap to wes profile

* update changelog
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nvnieuwk authored Dec 12, 2024
1 parent c1e9bdd commit 523c7a9
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2 changes: 1 addition & 1 deletion CHANGELOG.md
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Expand Up @@ -20,7 +20,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
5. Bumped the minimal Nextflow version to 24.10.0.
6. Added the somalier reports to the multiQC report.
7. Removed the `--output_suffix` parameter
8. Added some missing required paths to the `WES` and `seqplorer` profiles
8. Added some missing required parameters to the `WES` and `seqplorer` profiles

### Fixes

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2 changes: 2 additions & 0 deletions conf/wes.config
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Expand Up @@ -8,4 +8,6 @@ params {
callers = "haplotypecaller"
scatter_count = 8
roi = "${params.genomes_base}/Hsapiens/GRCh38/regions/CMGG_WES_analysis_ROI_v5.bed"
updio = true
automap = true
}

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