Fix some resources (#220)

* optimize resources * Update conf/modules.config --------- Co-authored-by: Nicolas Vannieuwkerke <[email protected]>
nf-cmgg · Nov 12, 2024 · 47d8b12 · 47d8b12
1 parent 0e7514e
commit 47d8b12
Showing 1 changed file with 6 additions and 3 deletions.
diff --git a/conf/modules.config b/conf/modules.config
@@ -133,6 +133,7 @@ process {
     }
 
     withName: "^.*CRAM_CALL_GATK4:GATK4_HAPLOTYPECALLER\$" {
+        label       = "process_low"
         time        = { 16.h  * task.attempt }
         ext.prefix  = {"${meta.id}.g"}
         ext.args    = {
@@ -555,9 +556,11 @@ process {
     */
 
     withName: "^.*VCF2DB\$" {
-        ext.args = "--a-ok gnomAD_AC --a-ok gnomAD_Hom"
-        ext.prefix = final_prefix
-        publishDir = [
+        container = "quay.io/cmgg/vcf2db:2020.02.24"
+        label       = "process_single"
+        ext.args    = "--a-ok gnomAD_AC --a-ok gnomAD_Hom"
+        ext.prefix  = final_prefix
+        publishDir  = [
             overwrite: true,
             path: final_output,
             mode: params.publish_dir_mode,