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0.2 post-ohbm release

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@jdkent jdkent released this 22 Aug 15:42
· 178 commits to master since this release
57a9dcd

What's Changed

  • feat: updated node and react scripts by @nicoalee in #352
  • 307 refactor loading and http requests using react query by @nicoalee in #362
  • feat: updated tests and removed old types by @nicoalee in #365
  • feat: add create meta-analysis button by @nicoalee in #366
  • feat: added redirect to created meta-analysis and unit tests by @nicoalee in #367
  • 361 improve meta analysis summary page by @nicoalee in #368
  • [TEST] skip tests if external service is not working by @jdkent in #353
  • [ENH] add studyset link by @jdkent in #364
  • 363 add ability to delete studies by @nicoalee in #373
  • [FIX] data type both by @jdkent in #375
  • [FIX] add httpx until schemathesis is fixed by @jdkent in #378
  • 371 enhance study search view to add studysets that a study is part of with better study addremove functionality by @nicoalee in #377
  • 356 add search for studysets by @nicoalee in #379
  • [ENH] change workflow to incorporate data for frontend tests by @jdkent in #372
  • [FIX] flask sqlalchemy by @jdkent in #385
  • [MAINT] use tilde versioning on dependencies by @jdkent in #387
  • [REF] neurosynth to compose by @jdkent in #386
  • [ENH] add meta analysis provenance by @jdkent in #389
  • [ENH] add project table by @jdkent in #393
  • feat: added plausible by @nicoalee in #392
  • [FIX] allow project to be null by @jdkent in #395
  • [FIX] add annotations when analysis is added, not just study by @jdkent in #397
  • Add/improve documentation by @jdkent in #333
  • [ENH] Add upload process (celery) by @jdkent in #332
  • [FIX] add new analysis annotation by @jdkent in #402
  • [FIX] celery tests by @jdkent in #405
  • [MAINT] delete compose packages by @jdkent in #409
  • [FIX] add api in context of current app by @jdkent in #410
  • [FIX] increase page size limit by @jdkent in #414
  • [FIX] only debug when specified by @jdkent in #413
  • [FIX] handled numeric input parse by @jdkent in #416
  • [REF] list user args by @jdkent in #415
  • [FIX] compose tests by @jdkent in #418
  • [FIX] study unique query by @jdkent in #417
  • [FIX] neurosynth ingestion by @jdkent in #419
  • change to refactored openapi by @jdkent in #420
  • [FIX] annotations not updating properly (again) by @jdkent in #421
  • [FIX] POST meta-analysis with project by @jdkent in #424
  • [ENH] upload neurostore table from results by @jdkent in #422
  • [FIX] update openapi spec by @jdkent in #427
  • [ENH] project public private by @jdkent in #428
  • [FIX] create neurostore study when project is created by @jdkent in #439
  • [FIX] compose bot by @jdkent in #440
  • [FIX] junit tests by @jdkent in #441
  • 381 restructure user experience with meta first approach by @nicoalee in #399
  • [FIX] upload key name by @jdkent in #442
  • chore(deps): bump @sideway/formula from 3.0.0 to 3.0.1 in /compose/neurosynth-frontend by @dependabot in #404
  • chore(deps): bump json5 from 1.0.1 to 1.0.2 in /compose/neurosynth-frontend by @dependabot in #398
  • [FIX] celery context by @jdkent in #445
  • feat: prevent scroll from changing number input, better support for e… by @nicoalee in #444
  • chore(deps): bump webpack from 5.74.0 to 5.83.1 in /compose/neurosynth-frontend by @dependabot in #443
  • [FIX] schemas by @jdkent in #446
  • [FIX] show diagnostic table at endpoint by @jdkent in #447
  • chore(deps-dev): bump jsonwebtoken from 8.5.1 to 9.0.0 in /compose/neurosynth-frontend by @dependabot in #396
  • chore(deps): bump decode-uri-component from 0.2.0 to 0.2.2 in /compose/neurosynth-frontend by @dependabot in #394
  • chore(deps): bump loader-utils from 2.0.2 to 2.0.4 in /compose/neurosynth-frontend by @dependabot in #391
  • feat: set the same order for all analyses - alphabetically by analysi… by @nicoalee in #448
  • feat: add default studyset name and description by @nicoalee in #454
  • feat: added more info for selecting a study by @nicoalee in #456
  • feat: updated save button sitting below annotations by @nicoalee in #460
  • 434 coordinate editing ability to add more than one row at a time by @nicoalee in #463
  • feat: removed autofill name for meta analysis by @nicoalee in #464
  • feat: made links clickable for study display by @nicoalee in #466
  • [FIX] swagger ui fix with prance by @jdkent in #467
  • [ENH] results endpoint improvements by @jdkent in #462
  • [FIX] null results by @jdkent in #468
  • [FIX] add new fields to point by @jdkent in #469
  • [FIX] update openapi spec by @jdkent in #470
  • [FIX] make value a float by @jdkent in #471
  • 436 proposal for coordinate table organization by @nicoalee in #472
  • [ENH] make the studies endpoint query faster by @jdkent in #474
  • [ENH] add order to Points object by @jdkent in #475
  • [FIX] add order and status by @jdkent in #477
  • [FIX] try to catch more errors on analysis creation by @jdkent in #478
  • [FIX] allow bot to add analysis to study owned by user by @jdkent in #479
  • [FIX] neurostore analysis upload by @jdkent in #481
  • [FIX] make analysis upload a task by @jdkent in #482
  • [ENH] use outerjoins to display studies by @jdkent in #483
  • 455 upload workflow post meta analysis run by @nicoalee in #491
  • chore(deps): bump fast-xml-parser from 4.0.12 to 4.2.4 in /compose/neurosynth-frontend by @dependabot in #484
  • feat: added semantic scholar to provide full text by @nicoalee in #492
  • 488 make sample size a default metadata key when the user owns the study by @nicoalee in #493
  • [ENH] abstract study by @jdkent in #486
  • [ENH] switch missing names to base_studies by @jdkent in #495
  • [ENH] Add sqltap by @jdkent in #496
  • [FIX] fix the study search endpoint by @jdkent in #497
  • [FIX] search capabilities by @jdkent in #498
  • feat: finished user improvements from feedback by @nicoalee in #499
  • feat: updated links for navbar docs and neurovault by @nicoalee in #501
  • bugfix: save tags by @nicoalee in #504
  • bugfix: handled non prisma case for exclusion selector popup by @nicoalee in #506
  • [ENH] allow multiword queries by @jdkent in #512
  • [ENH] add load_testing config by @jdkent in #523
  • [ENH] misc performance by @jdkent in #526
  • feat: added handling of expired tokens and handling of updates betwee… by @nicoalee in #511
  • chore(deps): bump fast-xml-parser from 4.2.4 to 4.2.5 in /compose/neurosynth-frontend by @dependabot in #524
  • chore(deps): bump semver from 6.3.0 to 6.3.1 in /compose/neurosynth-frontend by @dependabot in #525
  • Enh/add caching by @jdkent in #527
  • [FIX] bump gunicorn workers and change nested back to subquery by @jdkent in #528
  • [FIX] nested query by @jdkent in #529
  • [FIX] studyset nested by @jdkent in #530
  • feat: removed mark all as complete button if all are complete by @nicoalee in #531
  • fix: resolved bugs with out of sync curation, resolved issue with mis… by @nicoalee in #533
  • [FIX] switch caching strategy to redis by @jdkent in #532
  • feat: put specification details last when creating spec, improved int… by @nicoalee in #534
  • [ENH] add info and flat query parameters by @jdkent in #535
  • feat: add flat by @nicoalee in #538
  • feat: set cloned study annotations to be included by default by @nicoalee in #540
  • [ENH] ACE Ingestion by @jdkent in #536
  • feat: remove alpha from site and add to labels by @nicoalee in #555
  • [FIX] flake8 errors by @jdkent in #568
  • feat: add google analytics by @nicoalee in #560
  • feat: added neurosynth logo as favicon and change default text by @nicoalee in #558
  • chore(deps): bump word-wrap from 1.2.3 to 1.2.4 in /compose/neurosynth-frontend by @dependabot in #542
  • codespell: config, workflow + typos fixed by @yarikoptic in #541
  • [MAINT] update openapi by @jdkent in #571
  • [FIX/ENH] usernames by @jdkent in #570
  • [FIX] ignore sample_text by @jdkent in #572

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Full Changelog: v0.1...v0.2