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Update README
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bschilder committed Aug 22, 2024
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Expand Up @@ -14,9 +14,12 @@ To reproduce this entire study, we have provided [a quarto document](https://git
- Install the [quarto Command Line Tool](https://quarto.org/docs/get-started/), and the [`quarto` R package](https://cran.r-project.org/web/packages/quarto/index.html).
- Within the `manuscript` directory of the cloned repository, run `quarto render index.qmd` to generate the manuscript.

A pre-rendered PDF version of the manuscript is available here.
[A pre-rendered PDF version of the manuscript is available here](https://github.com/neurogenomics/rare_disease_celltyping/blob/master/manuscript/_manuscript/index.pdf).

### Datasets
### Datasets / Results

All of the datasets used in this study can be imported using functions within the `HPOExplorer` and `MSTExplorer` R packages.
Additional resources, such as phenotype-cell type enrichment results, can be found on the *Releases* pages of `HPOExplorer` and `MSTExplorer`.
- https://github.com/neurogenomics/HPOExplorer/releases
- https://github.com/neurogenomics/MSTExplorer/releases

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