Develop #140
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| # This workflow configures the environment and executes NEAT read-simulator tests using relative paths for a series of configuration files individually | ||
| # For more information on using Python with GitHub Actions, refer to: | ||
| # https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | ||
| name: NEAT Unit Tests | ||
| on: | ||
| push: | ||
| branches: [develop, main] | ||
| pull_request: | ||
| branches: [main] | ||
| jobs: | ||
| detailed_test_execution: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
| - uses: s-weigand/[email protected] | ||
| with: | ||
| conda-channels: [bioconda, conda-forge] | ||
| activate-conda: true | ||
| repository: NCSA/NEAT | ||
| - name: Environment Setup | ||
| run: | | ||
| conda env create -f environment.yml -n test_neat | ||
| conda activate test_neat | ||
| poetry install | ||
| cd config_template | ||
| - name: Run NEAT Simulation for config_test1 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test1.yml -o ../outputs/test1_read-simulator | ||
| - name: Run NEAT Simulation for config_test2 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test2.yml -o ../outputs/test2_read-simulator | ||
| - name: Run NEAT Simulation for config_test3 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test3.yml -o ../outputs/test3_read-simulator | ||
| - name: Run NEAT Simulation for config_test4 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test4.yml -o ../outputs/test4_read-simulator | ||
| - name: Run NEAT Simulation for config_test5 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test5.yml -o ../outputs/test5_read-simulator | ||
| - name: Run NEAT Simulation for config_test6 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test6.yml -o ../outputs/test6_read-simulator | ||
| - name: Run NEAT Simulation for config_test7 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test7.yml -o ../outputs/test7_read-simulator | ||
| - name: Run NEAT Simulation for config_test8 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test8.yml -o ../outputs/test8_read-simulator | ||
| - name: Run NEAT Simulation for config_test9 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test9.yml -o ../outputs/test9_read-simulator | ||
| - name: Run NEAT Simulation for config_test10 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test10.yml -o ../outputs/test10_read-simulator | ||
| - name: Run NEAT Simulation for config_test11 | ||
| run: python -m neat --log-level DEBUG read-simulator -c config_test11.yml -o ../outputs/test11_read-simulator | ||
