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add a separate publication tab to the explore page
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164
packages/data-portal-explore/src/components/PublicationTable.tsx
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,164 @@ | ||
| import _ from 'lodash'; | ||
| import React from 'react'; | ||
| import { faExternalLinkAlt } from '@fortawesome/free-solid-svg-icons'; | ||
| import { FontAwesomeIcon } from '@fortawesome/react-fontawesome'; | ||
| import { | ||
| AtlasDescription, | ||
| getPublicationAuthors, | ||
| getPublicationDate, | ||
| getPublicationDOI, | ||
| getPublicationJournal, | ||
| getPublicationPubMedID, | ||
| getPublicationTitle, | ||
| getPublicationUid, | ||
| PublicationContentType, | ||
| PublicationManifest, | ||
| PublicationSummary, | ||
| } from '@htan/data-portal-commons'; | ||
| import { | ||
| EnhancedDataTable, | ||
| getDefaultDataTableStyle, | ||
| } from '@htan/data-portal-table'; | ||
| import { truncatedTableCell } from '@htan/data-portal-explore'; | ||
|
|
||
| interface IPublicationTableProps { | ||
| publicationManifestByUid: { [uid: string]: PublicationManifest }; | ||
| publicationSummaryByPubMedID?: { [pubMedId: string]: PublicationSummary }; | ||
| } | ||
|
|
||
| export const PublicationTable: React.FunctionComponent<IPublicationTableProps> = ( | ||
| props | ||
| ) => { | ||
| const getSummary = (manifest: PublicationManifest) => | ||
| props.publicationSummaryByPubMedID?.[getPublicationPubMedID(manifest)]; | ||
|
|
||
| const columns = [ | ||
| { | ||
| name: 'Title', | ||
| selector: (manifest: PublicationManifest) => | ||
| getPublicationTitle(getSummary(manifest), manifest), | ||
| cell: (manifest: PublicationManifest) => ( | ||
| <a | ||
| href={`//${ | ||
| window.location.host | ||
| }/publications/${getPublicationUid(manifest)}`} | ||
| > | ||
| {getPublicationTitle(getSummary(manifest), manifest)} | ||
| </a> | ||
| ), | ||
| wrap: true, | ||
| sortable: true, | ||
| }, | ||
| { | ||
| name: 'Atlas', | ||
| selector: (manifest: PublicationManifest) => manifest.atlas_name, | ||
| cell: (manifest: PublicationManifest) => ( | ||
| <AtlasDescription | ||
| atlasMeta={manifest.AtlasMeta} | ||
| atlasName={manifest.AtlasMeta.lead_institutions} | ||
| /> | ||
| ), | ||
| wrap: true, | ||
| sortable: true, | ||
| }, | ||
| { | ||
| name: 'Authors', | ||
| selector: (manifest: PublicationManifest) => | ||
| getPublicationAuthors(getSummary(manifest), manifest).join( | ||
| ', ' | ||
| ), | ||
| cell: truncatedTableCell, | ||
| wrap: true, | ||
| sortable: true, | ||
| }, | ||
| { | ||
| name: 'Journal', | ||
| selector: (manifest: PublicationManifest) => | ||
| getPublicationJournal(getSummary(manifest), manifest), | ||
| wrap: true, | ||
| sortable: true, | ||
| }, | ||
| { | ||
| name: 'DOI', | ||
| selector: (manifest: PublicationManifest) => | ||
| getPublicationDOI(getSummary(manifest), manifest), | ||
| cell: (manifest: PublicationManifest) => { | ||
| const doi = getPublicationDOI(getSummary(manifest), manifest); | ||
| return doi ? ( | ||
| <a href={`https://doi.org/${doi}`}> | ||
| {doi} <FontAwesomeIcon icon={faExternalLinkAlt} /> | ||
| </a> | ||
| ) : undefined; | ||
| }, | ||
| wrap: true, | ||
| sortable: true, | ||
| }, | ||
| { | ||
| name: 'PubMed', | ||
| selector: (manifest: PublicationManifest) => | ||
| getPublicationPubMedID(manifest), | ||
| cell: (manifest: PublicationManifest) => { | ||
| const pubmedId = getPublicationPubMedID(manifest); | ||
| return pubmedId ? ( | ||
| <a href={`https://pubmed.ncbi.nlm.nih.gov/${pubmedId}`}> | ||
| {pubmedId} <FontAwesomeIcon icon={faExternalLinkAlt} /> | ||
| </a> | ||
| ) : undefined; | ||
| }, | ||
| wrap: true, | ||
| sortable: true, | ||
| }, | ||
| { | ||
| name: 'Content Type', | ||
| selector: (manifest: PublicationManifest) => | ||
| manifest.PublicationContentType, | ||
| cell: (manifest: PublicationManifest) => { | ||
| if ( | ||
| manifest.PublicationContentType?.toLowerCase() === | ||
| PublicationContentType.Prepublication | ||
| ) { | ||
| return <span className="text-danger">In Review</span>; | ||
| } else if ( | ||
| manifest.PublicationContentType?.toLowerCase() === | ||
| PublicationContentType.Preprint | ||
| ) { | ||
| return <span>Preprint</span>; | ||
| } else if ( | ||
| manifest.PublicationContentType?.toLowerCase() === | ||
| PublicationContentType.Published | ||
| ) { | ||
| return <span>Published</span>; | ||
| } else { | ||
| return manifest.PublicationContentType; | ||
| } | ||
| }, | ||
| wrap: true, | ||
| sortable: true, | ||
| }, | ||
| { | ||
| name: 'Publication Date', | ||
| selector: (manifest: PublicationManifest) => | ||
| getPublicationDate(getSummary(manifest), manifest), | ||
| wrap: true, | ||
| sortable: true, | ||
| }, | ||
| ]; | ||
|
|
||
| return ( | ||
| <EnhancedDataTable | ||
| columns={columns} | ||
| data={_.values(props.publicationManifestByUid)} | ||
| defaultSortField="YearofPublication" | ||
| defaultSortAsc={false} | ||
| striped={true} | ||
| dense={false} | ||
| noHeader={true} | ||
| pagination={true} | ||
| paginationPerPage={50} | ||
| paginationRowsPerPageOptions={[10, 20, 50, 100, 500]} | ||
| customStyles={getDefaultDataTableStyle()} | ||
| /> | ||
| ); | ||
| }; | ||
|
|
||
| export default PublicationTable; |
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