add a new step to update mapping files

ncihtan · Dec 26, 2024 · 20ac539 · 20ac539
1 parent 6f89a2c
commit 20ac539
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Showing 4 changed files with 4 additions and 2 deletions.
diff --git a/data/fetch_autominerva_mappings.sh b/data/fetch_autominerva_mappings.sh
@@ -0,0 +1 @@
+curl https://d3p249wtgzkn5u.cloudfront.net/final-output/htan-imaging-assets-latest.json
diff --git a/data/fetch_dsa_mappings.sh b/data/fetch_dsa_mappings.sh
@@ -0,0 +1 @@
+curl 'https://raw.githubusercontent.com/ncihtan/dsa-htan/master/synapseSync/htanCrosswalkFiles/mvpImageData.working.json'
diff --git a/data/update_dsa_mappings.sh b/data/update_dsa_mappings.sh
diff --git a/package.json b/package.json
@@ -10,7 +10,8 @@
   },
   "scripts": {
     "dev": "yarn run next dev",
-    "updateData": "yarn run findAndReplace && yarn run processSynapseJSON && yarn run gzip",
+    "updateMappings": "bash data/fetch_autominerva_mappings.sh > data/htan-imaging-assets.json && bash data/fetch_dsa_mappings.sh > data/dsa-images.json",
+    "updateData": "yarn run findAndReplace && yarn updateMappings && yarn run processSynapseJSON && yarn run gzip",
     "gzip": "yarn run gzipData && yarn run gzipMetadata",
     "gzipData": "gzip < public/syn_data.json > public/syn_data.json.gz && gzip < public/processed_syn_data.json > public/processed_syn_data.json.gz",
     "gzipMetadata": "rm -rf data/metadata_gzip/ && cp -r data/metadata data/metadata_gzip && find data/metadata_gzip -type f -exec gzip {} \\; -exec mv {}.gz {} \\;",
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		curl https://d3p249wtgzkn5u.cloudfront.net/final-output/htan-imaging-assets-latest.json
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		curl 'https://raw.githubusercontent.com/ncihtan/dsa-htan/master/synapseSync/htanCrosswalkFiles/mvpImageData.working.json'