remove deprecated resource_index

Dockerfile

@@ -6,7 +6,7 @@ RUN mkdir -p /srv/ontoportal/ontologies_linked_data
 COPY Gemfile* *.gemspec /srv/ontoportal/ontologies_linked_data/
 WORKDIR /srv/ontoportal/ontologies_linked_data
 RUN gem install bundler -v "$(grep -A 1 "BUNDLED WITH" Gemfile.lock | tail -n 1)"
-RUN bundle install
+RUN bundle install --jobs 4
 
 COPY . /srv/ontoportal/ontologies_linked_data
 

Gemfile

@@ -36,6 +36,3 @@ end
 # NCBO gems (can be from a local dev path or from rubygems/git)
 gem 'goo', github: 'ncbo/goo', branch: 'develop'
 gem 'sparql-client', github: 'ncbo/sparql-client', branch: 'develop'
-
-# ResourceIndex dependencies (managed per-platform)
-gem 'ncbo_resource_index', github: 'ncbo/resource_index'

Gemfile.lock

@@ -14,19 +14,6 @@ GIT
       systemu
       uuid
 
-GIT
-  remote: https://github.com/ncbo/resource_index.git
-  revision: 24a7f14a6da4f4a0eaba1016ca5a378dfccd7441
-  specs:
-    ncbo_resource_index (0.0.1)
-      elasticsearch (= 2.0.0)
-      mysql2 (= 0.5.2)
-      pony
-      ref
-      ruby-xxHash
-      sequel
-      typhoeus
-
 GIT
   remote: https://github.com/ncbo/sparql-client.git
   revision: fb4a89b420f8eb6dda5190a126b6c62e32c4c0c9
@@ -58,20 +45,10 @@ GEM
     docile (1.4.0)
     domain_name (0.5.20190701)
       unf (>= 0.0.5, < 1.0.0)
-    elasticsearch (2.0.0)
-      elasticsearch-api (= 2.0.0)
-      elasticsearch-transport (= 2.0.0)
-    elasticsearch-api (2.0.0)
-      multi_json
-    elasticsearch-transport (2.0.0)
-      faraday
-      multi_json
     email_spec (2.2.0)
       htmlentities (~> 4.3.3)
       launchy (~> 2.1)
       mail (~> 2.7)
-    ethon (0.15.0)
-      ffi (>= 1.15.0)
     eventmachine (1.2.7)
     faraday (1.10.0)
       faraday-em_http (~> 1.0)
@@ -126,7 +103,6 @@ GEM
       powerbar
     multi_json (1.15.0)
     multipart-post (2.1.1)
-    mysql2 (0.5.2)
     net-http-persistent (2.9.4)
     netrc (0.11.0)
     oj (2.18.5)
@@ -150,7 +126,6 @@ GEM
     rdf (1.0.8)
       addressable (>= 2.2)
     redis (4.6.0)
-    ref (2.0.0)
     regexp_parser (2.2.1)
     rest-client (2.1.0)
       http-accept (>= 1.7.0, < 2.0)
@@ -172,10 +147,8 @@ GEM
     rubocop-ast (1.16.0)
       parser (>= 3.1.1.0)
     ruby-progressbar (1.11.0)
-    ruby-xxHash (0.4.0.2)
     ruby2_keywords (0.0.5)
     rubyzip (1.3.0)
-    sequel (5.54.0)
     simplecov (0.21.2)
       docile (~> 1.1)
       simplecov-html (~> 0.11)
@@ -190,8 +163,6 @@ GEM
       eventmachine (~> 1.0, >= 1.0.4)
       rack (>= 1, < 3)
     thread_safe (0.3.6)
-    typhoeus (1.4.0)
-      ethon (>= 0.9.0)
     tzinfo (0.3.60)
     unf (0.1.4)
       unf_ext
@@ -216,7 +187,6 @@ DEPENDENCIES
   minitest
   minitest-reporters (>= 0.5.0)
   multi_json (~> 1.0)
-  ncbo_resource_index!
   oj (~> 2.0)
   omni_logger
   pony

lib/ontologies_linked_data/models/class.rb

@@ -3,15 +3,13 @@
 require "multi_json"
 require "ontologies_linked_data/models/notes/note"
 require "ontologies_linked_data/mappings/mappings"
-require "ncbo_resource_index"
 
 module LinkedData
   module Models
     class ClassAttributeNotLoaded < StandardError
     end
 
     class Class < LinkedData::Models::Base
-      include ResourceIndex::Class
 
       model :class, name_with: :id, collection: :submission,
             namespace: :owl, :schemaless => :true,

ontologies_linked_data.gemspec

@@ -28,7 +28,6 @@ Gem::Specification.new do |gem|
   gem.add_dependency("rsolr")
   gem.add_dependency("pony")
   gem.add_dependency("omni_logger")
-  gem.add_dependency("ncbo_resource_index")
 
   gem.add_development_dependency("email_spec")