AllegroGraph v8.0.1 update

ncbo · Jan 26, 2024 · bd3e741 · bd3e741
1 parent 4b6b7f4
commit bd3e741
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Showing 2 changed files with 19 additions and 18 deletions.
diff --git a/docker-compose.yml b/docker-compose.yml
@@ -59,9 +59,9 @@ services:
       GOO_BACKEND_NAME: ag
       GOO_PORT: 10035
       GOO_HOST: agraph-ut
-      GOO_PATH_QUERY: /repositories/bioportal_test
-      GOO_PATH_DATA: /repositories/bioportal_test/statements
-      GOO_PATH_UPDATE: /repositories/bioportal_test/statements
+      GOO_PATH_QUERY: /repositories/ontoportal_test
+      GOO_PATH_DATA: /repositories/ontoportal_test/statements
+      GOO_PATH_UPDATE: /repositories/ontoportal_test/statements
     profiles:
       - agraph
     depends_on:
@@ -92,7 +92,7 @@ services:
     image: solr:8
     volumes:
       - ./test/solr/configsets:/configsets:ro
-    #ports:
+    # ports:
     #  - "8983:8983"
     command:  ["solr-precreate", "term_search_core1", "/configsets/term_search"]
     healthcheck:
@@ -106,7 +106,7 @@ services:
     image: solr:8
     volumes:
       - ./test/solr/configsets:/configsets:ro
-    #ports:
+    # ports:
     #  - "8984:8983"
     command:  ["solr-precreate", "prop_search_core1", "/configsets/property_search"]
     healthcheck:
@@ -117,26 +117,26 @@ services:
       retries: 5
 
   agraph-ut:
-    image: franzinc/agraph:v8.0.0
+    image: franzinc/agraph:v8.0.1
     platform: linux/amd64
     environment:
       - AGRAPH_SUPER_USER=test
       - AGRAPH_SUPER_PASSWORD=xyzzy
     shm_size: 1g
-    # ports:
-    #  - 10035:10035
+      # ports:
+      #  - 10035:10035
     command: >
        bash -c "/agraph/bin/agraph-control --config /agraph/etc/agraph.cfg start
-       ; agtool repos create bioportal_test
+       ; agtool repos create --supersede ontoportal_test
        ; agtool users add anonymous
-       ; agtool users grant anonymous root:bioportal_test:rw
+       ; agtool users grant anonymous root:ontoportal_test:rw
        ; tail -f /agraph/data/agraph.log"
     healthcheck:
-      test: ["CMD-SHELL", "agtool storage-report bioportal_test || exit 1"]
-      start_period: 10s
-      interval: 60s
-      timeout: 5s
-      retries: 3
+      test: ["CMD-SHELL", "agtool storage-report ontoportal_test || exit 1"]
+      start_period: 30s #AllegroGraph can take a loooooong time to start
+      interval: 20s
+      timeout: 10s
+      retries: 20
     profiles:
       - agraph
 

diff --git a/run-unit-tests.sh b/run-unit-tests.sh
@@ -11,7 +11,8 @@ DC='docker compose'
 test/solr/generate_ncbo_configsets.sh
 
 # build docker containers
-$DC run --rm ruby bundle exec rake test TESTOPTS='-v'
+#$DC run --rm ruby bundle exec rake test TESTOPTS='-v'
 # run unit test with AG backend
-#$DC run --rm ruby-agraph bundle exec rake test TESTOPTS='-v'
-$DC stop
+$DC run --rm ruby-agraph bundle exec rake test TESTOPTS='-v'
+
+$DC --profile agraph --profile 4store stop