Skip to content

Commit

Permalink
Merge pull request #160 from evolarjun/master
Browse files Browse the repository at this point in the history
Citation and README updates
  • Loading branch information
vbrover authored Jan 15, 2025
2 parents 0e2291c + 76541af commit a26045f
Show file tree
Hide file tree
Showing 3 changed files with 1 addition and 53 deletions.
39 changes: 0 additions & 39 deletions CITATION.cff

This file was deleted.

1 change: 1 addition & 0 deletions CITATION.md
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
Please see our [wiki instructions on citing AMRFinderPlus](https://github.com/ncbi/amr/wiki#citation) for more information on how to cite AMRFinderPlus. Importantly we ask that you include both the software version and database version in your methods so people can reproduce your results.
14 changes: 0 additions & 14 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,17 +1,3 @@
# WARNING: This is an experimental version that includes StxTyper

Currently it will need to be compiled from source to install.

### Downloading and compiling AMRFinderPlus with StxTyper

git clone https://github.com/ncbi/amr.git
cd amr
git checkout stxtype
git submodule update --init
make
./amrfinder -u
make test

# NCBI Antimicrobial Resistance Gene Finder (AMRFinderPlus)

This software and the accompanying database are designed to find acquired antimicrobial resistance genes and point mutations in protein and/or assembled nucleotide sequences. We have also added "plus" stress, heat, and biocide resistance and virulence factors for [some organisms](https://github.com/evolarjun/amr/wiki/Curated-organisms).
Expand Down

0 comments on commit a26045f

Please sign in to comment.