hardcoded to lower but will need to hcange

naobservatory · Nov 20, 2024 · de9cc5a · de9cc5a
1 parent a20d198
commit de9cc5a
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Showing 6 changed files with 6 additions and 6 deletions.
diff --git a/modules/local/addFragDupToVirusReads/main.nf b/modules/local/addFragDupToVirusReads/main.nf
@@ -2,7 +2,7 @@
 process ADD_FRAG_DUP_TO_VIRUS_READS {
     label "tidyverse"
     cpus 1
-    memory "16.GB"
+    memory "15.GB"
     input:
         path(collapsed_ch)
         path(merged_bbmerge_results)

diff --git a/modules/local/collapseVirusReads/main.nf b/modules/local/collapseVirusReads/main.nf
@@ -2,7 +2,7 @@
 process COLLAPSE_VIRUS_READS {
     label "tidyverse"
     cpus 1
-    memory "32.GB"
+    memory "15.GB"
     input:
         path(virus_hits_filtered)
     output:

diff --git a/modules/local/filterVirusReads/main.nf b/modules/local/filterVirusReads/main.nf
@@ -2,7 +2,7 @@
 process FILTER_VIRUS_READS {
     label "tidyverse"
     cpus 1
-    memory "16.GB"
+    memory "15.GB"
     input:
         path(virus_hits)
         val(score_threshold)

diff --git a/modules/local/makeVirusReadsFasta/main.nf b/modules/local/makeVirusReadsFasta/main.nf
@@ -2,7 +2,7 @@
 process MAKE_VIRUS_READS_FASTA {
     label "tidyverse"
     cpus 1
-    memory "16.GB"
+    memory "15.GB"
     input:
         path(virus_hits_db)
     output:

diff --git a/modules/local/mergeSamKraken/main.nf b/modules/local/mergeSamKraken/main.nf
@@ -2,7 +2,7 @@
 process MERGE_SAM_KRAKEN {
     label "tidyverse"
     cpus 1
-    memory "16.GB"
+    memory "15.GB"
     input:
         tuple val(sample), path(kraken_processed), path(sam_processed)
     output:

diff --git a/modules/local/mergeTsvs/main.nf b/modules/local/mergeTsvs/main.nf
@@ -2,7 +2,7 @@
 process MERGE_TSVS {
     label "tidyverse"
     cpus 1
-    memory "16.GB"
+    memory "15.GB"
     input:
         path(tsvs)
         val(name)