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End-to-end MGS workflow test

Update run_validation.config (dropping read_type.config) #143

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Update run_validation.config (dropping read_type.config)

Update run_validation.config (dropping read_type.config) #143

Run time

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Job Run time
test-index
2m 23s
test-index
8m 33s
test-run
1m 46s
test-run
6m 27s
test-run-output
1m 45s
test-run-output
6m 28s
test-validation
1m 50s
test-validation
1m 50s
31m 2s