Code

Parallelize cggnn workflow#248

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jimmymathews merged 24 commits intomainnadeemlab/SPT:mainfrom parallel-cggnnnadeemlab/SPT:parallel-cggnnCopy head branch name to clipboardNov 17, 2023

+890-636

Commits

Commits on Nov 7, 2023

• copy modules, mostly unmodified, from cg-gnn

  CarlinLiao

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  7cff4d9

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• adapt to spt style

  CarlinLiao

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• missed some type hints to update

  CarlinLiao

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Commits on Nov 8, 2023

• tests for cggnn transform port

  CarlinLiao

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  8d7f14e

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Commits on Nov 9, 2023

• Merge branch 'main' into cggnn-transforms

  CarlinLiao

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• fixed graph tests

  CarlinLiao

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  71bdb1f

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Commits on Nov 10, 2023

• Merge branch 'main' into cggnn-transforms

  CarlinLiao

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• removed imports from top-level submodule

  CarlinLiao

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Commits on Nov 13, 2023

• prepare to parallelize graph generation

  CarlinLiao

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• Merge branch 'main' into parallel-cggnn

  CarlinLiao

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Commits on Nov 15, 2023

• match cggnn parameter names to standard

  CarlinLiao

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• fix CLI arg typo

  CarlinLiao

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• make create_dataset available to public

  CarlinLiao

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Commits on Nov 16, 2023

• parallelized graph creation

  CarlinLiao

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  a57d891

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• remove unused parameters

  CarlinLiao

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  3a83b66

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• update environment-dependent artifacts

  CarlinLiao

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  2d766d7

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• update required extras for spt

  CarlinLiao

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• Merge branch 'main' into parallel-cggnn

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• Merge branch 'parallel-cggnn' of github.com:nadeemlab/SPT into parallel-cggnn

  CarlinLiao

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Commits on Nov 17, 2023

• add graphs with importance scores

  CarlinLiao

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  f616c36

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• Update docs

  jimmymathews

  committed
  c3b4a05

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• Correct typo

  jimmymathews

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• Syntax list

  jimmymathews

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• Remove commented blocks

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