Updates and fixes based on gpuNUFFT

mind-inria · Feb 11, 2025 · 8ac1159 · 8ac1159
2 parents 2f515d6 + e4df3aa
commit 8ac1159
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diff --git a/.github/workflows/build.yaml b/.github/workflows/build.yaml
@@ -12,7 +12,7 @@ permissions:
 jobs:
   build-book:
     name: Build Jupyter-book
-    runs-on: cpu
+    runs-on: gpu
 
     steps:
       - name: Checkout code

diff --git a/requirements.txt b/requirements.txt
@@ -1,8 +1,7 @@
 jupyter-book
 matplotlib
 numpy<2.0
-finufft
-mri-nufft
+mri-nufft[finufft,cufinufft,gpunufft]
 pyWavelets
 brainweb-dl
 pysap-mri

diff --git a/src/11.Cartesian_SelfCalibrated_CS-pMRI_recon.ipynb b/src/11.Cartesian_SelfCalibrated_CS-pMRI_recon.ipynb
diff --git a/src/12.non-Cartesian_SelfCalibrated_CS-pMRI_recon.ipynb b/src/12.non-Cartesian_SelfCalibrated_CS-pMRI_recon.ipynb
diff --git a/src/14.example_fastMRI_Unet.ipynb b/src/14.example_fastMRI_Unet.ipynb
diff --git a/src/_toc.yml b/src/_toc.yml
@@ -18,3 +18,4 @@ chapters:
   - file: 11.Cartesian_SelfCalibrated_CS-pMRI_recon.ipynb
   - file: 12.non-Cartesian_SelfCalibrated_CS-pMRI_recon.ipynb
   - file: 13.Cartesian_Calibrationless_CS-pMRI_recon.ipynb
+  - file: 14.example_fastMRI_Unet.ipynb