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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(as_tibble,XStringSet)
S3method(as_tibble,otu_table)
S3method(as_tibble,phyloseq)
S3method(as_tibble,sample_data)
S3method(as_tibble,taxonomyTable)
S3method(glimpse,sample_data)
S3method(glimpse,taxonomyTable)
S3method(print,otu_table)
S3method(print,sample_data)
S3method(print,taxonomyTable)
S3method(unique_or_na,default)
S3method(unique_or_na,factor)
export("%>%")
export(filter_sample_data)
export(filter_tax_table)
export(filter_taxa)
export(filter_taxa2)
export(inner_join_sample_data)
export(inner_join_tax_table)
export(left_join_sample_data)
export(left_join_tax_table)
export(merge_samples2)
export(merge_taxa_vec)
export(mutate_sample_data)
export(mutate_tax_table)
export(orient_taxa)
export(plot_bar)
export(plot_heatmap)
export(plot_tree)
export(psmelt)
export(relocate_sample_data)
export(relocate_tax_table)
export(rename_sample_data)
export(rename_tax_table)
export(rename_with_sample_data)
export(rename_with_tax_table)
export(select_sample_data)
export(select_tax_table)
export(tax_glom)
export(tip_glom)
export(transform_sample_counts)
export(transmute_sample_data)
export(transmute_tax_table)
export(tree_glom)
export(unique_or_na)
exportMethods(otu_table)
exportMethods(sample_data)
exportMethods(show)
exportMethods(tax_table)
import(phyloseq, except = c(psmelt, plot_bar, plot_tree, plot_heatmap, tax_glom, tip_glom, filter_taxa, transform_sample_counts))
importFrom(data.table,data.table)
importFrom(data.table,setkey)
importFrom(data.table,setkeyv)
importFrom(ggplot2,aes)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_grid)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_raster)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,scale_fill_gradient)
importFrom(ggplot2,scale_size_continuous)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_x_discrete)
importFrom(ggplot2,scale_y_discrete)
importFrom(ggplot2,theme)
importFrom(magrittr,"%>%")
importFrom(scales,log_trans)
importFrom(tibble,as_tibble)
importFrom(tibble,glimpse)
importFrom(vegan,scores)