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  1. RNA-Seq RNA-Seq Public template

    STAR pipeline for RNA-Seq

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  2. sra-download sra-download Public

    Batch download published data with sra-toolkit

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  3. HoloCubic HoloCubic Public

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  4. nucleo nucleo Public

    Forked from carmelinacharalambous/nucleo

    Workflow that creates all the BAM files for the cfDNA assay based FASTQ file at MSK

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  5. ACCESS-Pipeline ACCESS-Pipeline Public

    Forked from mskcc/ACCESS-Pipeline

    cfDNA Sequencing Pipeline with UMI

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