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Save settings in yaml/json format #66

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mhoban opened this issue May 29, 2024 · 3 comments
Open

Save settings in yaml/json format #66

mhoban opened this issue May 29, 2024 · 3 comments
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enhancement New feature or request

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@mhoban
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mhoban commented May 29, 2024

Right now settings are saved as settings.txt, with more or less human-readable contents

save them as yaml and/or json for better reusability
@mhoban mhoban added the enhancement New feature or request label May 29, 2024
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mhoban commented May 29, 2024 •
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Use groovy.yaml.YamlBuilder

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mhoban commented Jul 11, 2024

To be clear, this refers to the settings for individual process steps, not the overall settings for the pipeline.

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mhoban commented Sep 12, 2024

nf-core does this for every step, saving a 'versions.yml' file that includes the version of each tool they run.

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