add es image to docker hub and separate dockerfiles in docker dir

docker-compose.cicd.yml

@@ -24,10 +24,8 @@ services:
     #   - opencr
 
   es:
-    build:
-      dockerfile: Dockerfile-es
-      context: ./
     container_name: es
+    image: intrahealth/elasticsearch:latest
     environment:
       - node.name=es01
       - discovery.type=single-node

docker-compose.yml

@@ -11,10 +11,8 @@ services:
       - opencr
 
   es:
-    build:
-      dockerfile: Dockerfile-es
-      context: ./
     container_name: es
+    image: intrahealth/elasticsearch:latest
     environment:
       - node.name=es01
       - discovery.type=single-node

docker/elasticsearch/dockerhub.sh

@@ -0,0 +1,8 @@
+#!/usr/bin/env bash
+set -ex
+
+# automate tagging with the short commit hash
+docker build --no-cache -t intrahealth/elasticsearch:$(git rev-parse --short HEAD) .
+docker tag intrahealth/elasticsearch:$(git rev-parse --short HEAD) intrahealth/elasticsearch
+docker push intrahealth/elasticsearch:$(git rev-parse --short HEAD)
+docker push intrahealth/elasticsearch:latest

Dockerfile → docker/opencr/Dockerfile

@@ -1,7 +1,7 @@
 FROM node:erbium-slim
 
 RUN mkdir -p /var/log
-COPY . /src/
+COPY ../ /src/
 WORKDIR /src/server
 RUN npm install
 

docs/notebooks/basic_query_in_python.ipynb

@@ -42,11 +42,20 @@
   },
   {
    "cell_type": "code",
-   "execution_count": null,
+   "execution_count": 3,
    "metadata": {
     "scrolled": true
    },
-   "outputs": [],
+   "outputs": [
+    {
+     "name": "stderr",
+     "output_type": "stream",
+     "text": [
+      "/usr/local/lib/python3.7/site-packages/urllib3/connection.py:394: SubjectAltNameWarning: Certificate for localhost has no `subjectAltName`, falling back to check for a `commonName` for now. This feature is being removed by major browsers and deprecated by RFC 2818. (See https://github.com/urllib3/urllib3/issues/497 for details.)\n",
+      "  SubjectAltNameWarning,\n"
+     ]
+    }
+   ],
    "source": [
     "server = 'https://localhost:3000/Patient'\n",
     "headers = {'Content-Type': 'application/json'}\n",
@@ -58,14 +67,14 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 5,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "Patient/07d346c7-b787-4a57-a280-7ad4d0cc2086\n"
+      "Patient/d240c89e-b34f-4394-95a6-05fe11654998\n"
      ]
     }
    ],