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MIG workshop: multivariate analysis with mixOmics

Author: Prof Kim-Anh Lê Cao

Audience Prerequisites Duration
Biologists & computational biologists Intro to R ~ 3 hours
Biologists & computational biologists Intro to linear models ~ 2.5 hours

Description

This repository includes material for our workshop 'Multivariate analysis for omics data'. This workshop will introduce the fundamental principles of multivariate analysis with hands-on applications for omics data. We will use the mixOmics R package.

Installation Requirements

Install R first, then RStudio. Download the most recent version of R and RStudio using the links below:

  • R (Preferably R version > 4.0)
  • RStudio

Install the R packages. Type the R command lines:

# Install mixOmics using BiocManager
if (!requireNamespace("BiocManager", quietly = TRUE)) {
  install.packages("BiocManager")
}
BiocManager::install(c("mixOmics"))

# Test if the package has correctly been installed (i.e no errors messages, warnings are ok)
library(mixOmics)

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