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It was pointed out to me on a few test files that the converted output had the first slice as last within each volume, and I noticed that the logic utilized for slice ordering
int(chunk.slice_id / 2) - 1
becomes -1 ifchunk.slice_id
is 0, which was happening with the test E2E files.Are there other files that you've encountered where the
- 1
is needed? Removing it seems like a simple solution, but if some files need that last bit of the equation, then there might need to be more logic around whether or not to do the subtraction...