Skip to content

Commit

Permalink
coupling: add to whatsnew section
Browse files Browse the repository at this point in the history
  • Loading branch information
JoepVanlier committed Jan 18, 2024
1 parent 0fa49d0 commit 8799615
Show file tree
Hide file tree
Showing 5 changed files with 23 additions and 0 deletions.
2 changes: 2 additions & 0 deletions docs/theory/force_calibration/active.rst
Original file line number Diff line number Diff line change
Expand Up @@ -92,6 +92,8 @@ We can also include a distance to the surface like before. This results in an ex
coefficient :math:`\gamma` that depends on the distance to the surface which is given by the same
equations as listed in the section on the :doc:`hydrodynamically correct model<hyco>`.

.. _bead_bead_theory:

Bead-bead coupling
------------------

Expand Down
2 changes: 2 additions & 0 deletions docs/tutorial/force_calibration.rst
Original file line number Diff line number Diff line change
Expand Up @@ -394,6 +394,8 @@ However, if we do not provide the height above the surface, we can see that the
Consequently, when this model is selected, this parameter affects both passive and active calibration.
For more information on this see the :doc:`theory section on force calibration</theory/force_calibration/force_calibration>` section.

.. _bead_bead_tutorial:

Active calibration with two beads far away from the surface
-----------------------------------------------------------

Expand Down
15 changes: 15 additions & 0 deletions docs/whatsnew/1.4.0/1_4_0.rst
Original file line number Diff line number Diff line change
@@ -0,0 +1,15 @@
Pylake 1.4.0
============

.. only:: html

Pylake `v1.4.0` has been released with new features and improvements to existing analyses. Here’s some of the highlights:

Bead-bead coupling correction
-----------------------------

.. figure:: correction_factor_whatsnew.png

When performing active calibration with two beads coupling effects can bias the estimated calibration parameters (force and displacement sensitivity, and the stiffness).
In Pylake 1.4.0, we include a model to account for bead-bead coupling between two beads in bulk.
See :ref:`theory<bead_bead_theory>` and :ref:`tutorial<bead_bead_tutorial>` for more information.
3 changes: 3 additions & 0 deletions docs/whatsnew/1.4.0/correction_factor_whatsnew.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
1 change: 1 addition & 0 deletions docs/whatsnew/index.rst
Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,7 @@ For a full list of new features and changes, please refer to the :doc:`changelog
:caption: Contents
:maxdepth: 1

1.4.0/1_4_0
1.3.0/1_3_0
1.2.0/1_2_0
1.1.0/1_1_0
Expand Down

0 comments on commit 8799615

Please sign in to comment.