refactor(backend): remove docker-compose.yml and reference from the r…

…eadme

backend/README.md

@@ -22,7 +22,7 @@ All commands mentioned in this section are run from the `backend` directory unle
 
 The backend is configured via
 [Spring properties](https://docs.spring.io/spring-boot/docs/current/reference/html/features.html#features.external-config)
-that need to be passed on startup, e.g. via command line argument (also see docker-compose.yml).
+that need to be passed on startup, e.g. via command line argument.
 You need to set:
 * the database URL, username and password:
 ```

generate_local_test_config.sh

@@ -7,12 +7,10 @@ helmChart="$root"/kubernetes/preview
 
 backend_config="$root"/website/tests/config/backend_config.json
 helm template name-does-not-matter "$helmChart" --show-only templates/pathoplexus-backend-config.yaml | \
-  awk '/backend_config.json: \|/{getline; print; exit}' - \
-  > "$backend_config"
+ yq eval '.data."backend_config.json"' - > "backend_config"
 echo "wrote backend config to $backend_config"
 
 website_config="$root"/website/tests/config/website_config.json
 helm template name-does-not-matter "$helmChart" --show-only templates/pathoplexus-website-config.yaml | \
-  awk '/website_config.json: \|/{getline; print; exit}' - \
-  > "$website_config"
+ yq eval '.data."website_config.json"' - > "$website_config"
 echo "wrote website config to $website_config"

website/README.md

@@ -48,23 +48,6 @@ specified in the `CONFIG_DIR` environment variable:
 
 Check our tests and examples for working config files.
 
-## Start from docker-compose
-
-Make sure you are authenticated for the private pathoplexus docker registry (see [here](../README.md) for a step-by-step guide).
-
-We have a [docker-compose config](../docker-compose.yml) to start the website. For flexibility the docker image name is read from the environment.
-To use the `:latest` image, you can just run (from the repository root):
-
-```bash
-BACKEND_IMAGE=doesNotMatterHere WEBSITE_IMAGE=ghcr.io/pathoplexus/website:latest docker compose up website
-```
-
-To pull the latest version of the image, run:
-
-```bash
-docker pull ghcr.io/pathoplexus/website:latest
-```
-
 ## Logging
 
 The website writes logs to stdout.