refresh contexts based on GO changes upstream

linkml · Oct 11, 2024 · fa7602a · fa7602a
1 parent c61e812
commit fa7602a
Show file tree

Hide file tree

Showing 6 changed files with 226 additions and 30 deletions.
diff --git a/src/prefixmaps/data/go.csv b/src/prefixmaps/data/go.csv
@@ -20,6 +20,7 @@ go,FMA,http://purl.obolibrary.org/obo/FMA_,canonical
 go,FYPO,http://purl.obolibrary.org/obo/FYPO_,canonical
 go,GeneDB,http://identifiers.org/genedb/,canonical
 go,GO,http://purl.obolibrary.org/obo/GO_,canonical
+go,GO_REF,http://purl.obolibrary.org/obo/go/references/,canonical
 go,gomodel,http://model.geneontology.org/,canonical
 go,GR_GENE,http://identifiers.org/gramene.gene/,canonical
 go,GR_PROTEIN,http://identifiers.org/gramene.protein/,canonical
@@ -39,6 +40,7 @@ go,NCBITaxon,http://purl.obolibrary.org/obo/NCBITaxon_,canonical
 go,PANTHER,http://identifiers.org/panther.family/,canonical
 go,PATO,http://purl.obolibrary.org/obo/PATO_,canonical
 go,PlasmoDB,http://identifiers.org/plasmodb/,canonical
+go,PMID,http://identifiers.org/pubmed/,canonical
 go,PO,http://purl.obolibrary.org/obo/PO_,canonical
 go,PomBase,http://identifiers.org/pombase/,canonical
 go,PR,http://purl.obolibrary.org/obo/PR_,canonical
@@ -50,6 +52,7 @@ go,SGN,http://identifiers.org/sgn/,canonical
 go,SO,http://purl.obolibrary.org/obo/SO_,canonical
 go,TAIR,http://identifiers.org/tair.locus/,canonical
 go,TGD,http://identifiers.org/tgd/,canonical
+go,TreeGrafter,http://identifiers.org/panther.family/,namespace_alias
 go,TriTrypDB,http://identifiers.org/tritrypdb/,canonical
 go,UBERON,http://purl.obolibrary.org/obo/UBERON_,canonical
 go,UniProtKB,http://identifiers.org/uniprot/,canonical