Microbiome_CRCdrug_Turnover

We report quantitative evidence of inter-individual variability in microbiome metabolism of the inactive metabolite of irinotecan to its active form.

Overview

project
|- README          # the top level description of content
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|- doc/   
|  |- requirements.md         
|  +- paper/       # manuscript
|- data            
|  |- references/  # reference files to be used in analysis
|  |- stamps/      # count data and metadata input for [STAMP](http://kiwi.cs.dal.ca/Software/STAMP) 
|  +- lc_msms/     # raw lc-msms data
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|- analysis
|
|- results         
|  |- tables/      # output tables for BG, transporters and KEGG analysis
|  +- figures/     # graphs