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  • MITNANEX Public

    MItocondrial NAnopore reads EXtractor De novo from WGS. It also assembles the mitogenome.

    Python 2 Updated Jan 22, 2025
  • This is to follow the book Bioinformatics Algorithms

    Jupyter Notebook 1 1 Updated Jan 16, 2025
  • Rust Updated Jan 10, 2025
  • MAUS Public

    Metagenomic Analysis workflow at UniSeqs

    Jupyter Notebook Updated Oct 8, 2024
  • pneumoPipe Public

    Pipeline for Streptococcus pneumoniae assembly, annotation and serotyping using Illumina WGS

    Shell Updated Oct 1, 2024
  • SeroCall Public

    Forked from knightjimr/SeroCall

    Pneumococcal serotype quantification using NGS reads

    Python GNU General Public License v3.0 Updated Aug 20, 2024
  • juanjo255 Public

    Updated Jun 11, 2024
  • Store data science projects.

    Jupyter Notebook Updated Jun 8, 2024
  • kraken2 Public

    Forked from DerrickWood/kraken2

    This contains a modify version of the k2 file to download using https protocol libraries and taxonomy

    C++ MIT License Updated May 30, 2024
  • Tool intended to get SRA run accessions and its metadata for every Bioproject presented in a csv file.

    Python Updated May 9, 2024
  • Exercise in python for bioinformatic

    Jupyter Notebook Updated Apr 20, 2024
  • jaratest Public

    Forked from sjara/jaratest

    Collection of test scripts

    Python Updated Nov 29, 2023
  • tkparadigms Public

    Forked from sjara/tkparadigms

    Taskontrol behavioral paradigms from JaraLab.

    Python Updated Nov 12, 2023
  • NanoPlot Public

    Forked from wdecoster/NanoPlot

    Plotting scripts for long read sequencing data

    Python MIT License Updated Oct 27, 2023
  • This tool is to build the link of the GBIF web page that describes a specie.

    Python Updated Jul 2, 2023
  • This repository is for all my work done during my 1 year internship at University of Oregon.

    CSS Updated Mar 4, 2023
  • This repo is for upload all code related to the book "From Python to NumPy"

    Jupyter Notebook Updated Feb 26, 2023
  • Technical test of a REST API for an Hospital

    Python Updated Mar 18, 2022
  • HTML Updated Jan 14, 2022
  • JavaScript Updated Jan 9, 2022
  • JavaScript Updated Jan 8, 2022
  • Repo intended to follow The Odin Project

    HTML Updated Jan 6, 2022
  • Repo for bioinformatic course of University of California San Diego in Coursera

    Python Updated Jan 5, 2022
  • Repo to develop beer page project

    JavaScript 1 1 Updated Jan 2, 2022
  • api_beers Public

    Api for the beer page

    JavaScript Updated Dec 29, 2021
  • RNA-seq differential expression analysis practical demostration for undergrad students.

    R Updated Nov 26, 2021
  • python programming challenges

    Python Updated Aug 1, 2021