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22 Open 8 Closed
22 Open 8 Closed
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Issues list

Potential issue with sva_network
#61 opened Apr 30, 2024 by s-a-nersisyan
SVA() : Error in density.default(x, adjust = adj) : 'x' contains missing values
#60 opened May 4, 2023 by sarakn97
combat for epic array data
#59 opened Mar 20, 2023 by bioinfonext
What to do when n.sv is large
#57 opened Jan 28, 2023 by bhallmar
Correct way to use n.sv() on count based data: normalize or no?
#56 opened Jan 8, 2023 by zntaylgit
Should the data be scaled before running Combat?
#55 opened Apr 24, 2022 by lincj1994
2
Runtime of Combat
#54 opened Apr 19, 2022 by WarrenSu2022
2
ComBat doesn't work when data matrix contains only 1 variable
#46 opened Mar 10, 2021 by lashmore
Error in return() call in fsva().
#45 opened Sep 17, 2020 by rorynolan
How do I use ComBat_seq to get the matrix count after removing the batch
#44 opened Sep 14, 2020 by BeyondMyPast228
1
sva Vignettes example qValues vs qValuesSv
#43 opened May 25, 2020 by arkyl
Error in while (change > conv) { : missing value where TRUE/FALSE needed
#42 opened Mar 30, 2020 by huangl07
11
sva_network Example(sva_network) should show transposed matrix
#38 opened Oct 17, 2019 by InesdeSantiago
Combat returns NaN
#37 opened Jun 5, 2019 by vkorobeynyk
6
Suggested clarification of contrasts matrix in vignette
#36 opened Dec 15, 2018 by lefeverde
f.pvalue function gives absurd results on zero-variance rows
#34 opened Jun 2, 2018 by DarwinAwardWinner
2
Error in density.default
#27 opened May 25, 2017 by royfrancis
6
ComBat fails with updated ComBat.R
#24 opened Mar 22, 2017 by cafletezbrant
4
ComBat silently fails when a row has non-zero values for only a single batch and mean.only=TRUE
#14 opened May 30, 2016 by khughitt
19
question regarding ComBat(mean.only=TRUE) vs. FALSE
#11 opened May 2, 2016 by abelew
4
two step sva bug
#9 opened Oct 27, 2015 by ajbass
Rows are matching, though Combat still generates error with "cbind"
#6 opened May 20, 2015 by ninaincali
ProTip! What’s not been updated in a month: updated:<2025-02-06.