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fixed mut_type
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jonas-fuchs committed Oct 23, 2023
1 parent efe1f65 commit b8eac47
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion virheat/scripts/data_prep.py
Original file line number Diff line number Diff line change
Expand Up @@ -66,7 +66,7 @@ def read_vcf(vcf_file):
for key in header[0:6]:
vcf_dict[key] = []
# functional effect
vcf_dict["MUT_TYPE"] = []
vcf_dict["MUT_TYPE_"] = []
# info field
for line in lines:
for info in line[7].split(";"):
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