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jonas-fuchs committed Nov 13, 2024
1 parent 500c1a5 commit 38b3181
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions virheat/scripts/data_prep.py
Original file line number Diff line number Diff line change
Expand Up @@ -297,8 +297,7 @@ def parse_gff3(file, reference):
gff_values = line.strip().split("\t")
# sanity check that the line has a unique ID for the dict key
# this is a lazy fix as it will exclude e.g. exons without ID and
# only a parent -> fixing this might require more complex parsing
# and data structure
# only a parent
if not gff_values[8].startswith("ID="):
continue
# create keys
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