Skip to content

v.1.1
Compare
Choose a tag to compare
@jonas-fuchs jonas-fuchs released this 24 Jan 15:12
· 13 commits to master since this release
v.1.1
547246b
This commit was created on GitHub.com and signed with GitHub’s verified signature.
GPG key ID: B5690EEEBB952194
Learn about vigilant mode.

NEW:

  • introduced a config class that enables the user to provide a custom varVAMP config file. Instead of changing the config.py file, the user can can prepend VARVAMP_CONFIG=<path/to/custom_config> to any regular varvamp command line without any changes to the code basis.

FIXES:

  • consistent primer naming over all modes
  • blast is now called by a sub-process as biopython's blast module will be removed in the future.
  • updated the documentation
  • fixed the --threads option in combination with -db

Large thanks to @wm75 for these improvements!

Contributors

wm75
Assets 2
Loading