first commit

LICENSE.md

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2016-present George Cushen
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

README.md

@@ -0,0 +1,46 @@
+<p align="center"><a href="https://sourcethemes.com/academic/" target="_blank" rel="noopener"><img src="https://sourcethemes.com/academic/img/logo_200px.png" alt="Academic logo"></a></p>
+
+# Academic Kickstart: The Template for [Academic Website Builder](https://sourcethemes.com/academic/)
+
+[**Academic**](https://github.com/gcushen/hugo-academic) makes it easy to create a beautiful website for free using Markdown, Jupyter, or RStudio. Customize anything on your site with widgets, themes, and language packs. [Check out the latest demo](https://academic-demo.netlify.app/) of what you'll get in less than 10 minutes, or [view the showcase](https://sourcethemes.com/academic/#expo).
+
+**Academic Kickstart** provides a minimal template to kickstart your new website.
+
+- 👉 [**Get Started**](#install)
+- 📚 [View the **documentation**](https://sourcethemes.com/academic/docs/)
+- 💬 [Chat with the **Academic community**](https://spectrum.chat/academic) or [**Hugo community**](https://discourse.gohugo.io)
+- 🐦 Twitter: [@source_themes](https://twitter.com/source_themes) [@GeorgeCushen](https://twitter.com/GeorgeCushen) [#MadeWithAcademic](https://twitter.com/search?q=%23MadeWithAcademic&src=typd)
+- 💡 [Request a **feature** or report a **bug**](https://github.com/gcushen/hugo-academic/issues)
+- ⬆️ **Updating?** View the [Update Guide](https://sourcethemes.com/academic/docs/update/) and [Release Notes](https://sourcethemes.com/academic/updates/)
+- :heart: **Support development** of Academic:
+  - ☕️ [**Donate a coffee**](https://paypal.me/cushen)
+  - 💵 [Become a backer on **Patreon** and **unlock rewards**](https://www.patreon.com/cushen)
+  - 🖼️ [Decorate your laptop or journal with an Academic **sticker**](https://www.redbubble.com/people/neutreno/works/34387919-academic)
+  - 👕 [Wear the **T-shirt**](https://academic.threadless.com/)
+  - :woman_technologist: [**Contribute**](https://sourcethemes.com/academic/docs/contribute/)
+
+[![Screenshot](https://raw.githubusercontent.com/gcushen/hugo-academic/master/academic.png)](https://github.com/gcushen/hugo-academic/)
+
+## Install
+
+You can choose from one of the following four methods to install:
+
+* [**one-click install using your web browser (recommended)**](https://sourcethemes.com/academic/docs/install/#install-with-web-browser)
+* [install on your computer using **Git** with the Command Prompt/Terminal app](https://sourcethemes.com/academic/docs/install/#install-with-git)
+* [install on your computer by downloading the **ZIP files**](https://sourcethemes.com/academic/docs/install/#install-with-zip)
+* [install on your computer with **RStudio**](https://sourcethemes.com/academic/docs/install/#install-with-rstudio)
+
+Then [personalize your new site](https://sourcethemes.com/academic/docs/get-started/).
+
+## Ecosystem
+
+* **[Academic Admin](https://github.com/sourcethemes/academic-admin):** An admin tool to import publications from BibTeX or import assets for an offline site
+* **[Academic Scripts](https://github.com/sourcethemes/academic-scripts):** Scripts to help migrate content to new versions of Academic
+
+## License
+
+Copyright 2017-present [George Cushen](https://georgecushen.com).
+
+Released under the [MIT](https://github.com/sourcethemes/academic-kickstart/blob/master/LICENSE.md) license.
+
+[![Analytics](https://ga-beacon.appspot.com/UA-78646709-2/academic-kickstart/readme?pixel)](https://github.com/igrigorik/ga-beacon)

academic.Rproj

@@ -0,0 +1,16 @@
+Version: 1.0
+
+RestoreWorkspace: Default
+SaveWorkspace: Default
+AlwaysSaveHistory: Default
+
+EnableCodeIndexing: Yes
+UseSpacesForTab: Yes
+NumSpacesForTab: 2
+Encoding: UTF-8
+
+RnwWeave: Sweave
+LaTeX: pdfLaTeX
+
+AutoAppendNewline: Yes
+StripTrailingWhitespace: Yes

assets/images/icon-pack/site.webmanifest

@@ -0,0 +1 @@
+{"name":"","short_name":"","icons":[{"src":"/android-chrome-192x192.png","sizes":"192x192","type":"image/png"},{"src":"/android-chrome-512x512.png","sizes":"512x512","type":"image/png"}],"theme_color":"#ffffff","background_color":"#ffffff","display":"standalone"}

config.toml

@@ -0,0 +1,7 @@
+# Academic Website Builder
+# https://sourcethemes.com/academic/
+#
+# The presence of this file is for compatibility with Blogdown and Forestry.
+# If you are not using those tools, this file may be deleted.
+#
+# The actual configuration files are stored in the `config/_default/` folder.

config/_default/config.toml

@@ -0,0 +1,107 @@
+# Configuration of Hugo
+# Guide: https://sourcethemes.com/academic/docs/get-started/
+# Hugo Documentation: https://gohugo.io/getting-started/configuration/#all-configuration-settings
+#
+# This file is formatted using TOML syntax - learn more at https://learnxinyminutes.com/docs/toml/
+# Each configuration section is defined by a name in square brackets (e.g. `[outputs]`).
+
+# Title of your site
+title = "Academic"
+
+# The URL of your site.
+# End your URL with a `/` trailing slash, e.g. `https://example.com/`.
+baseurl = "/"
+
+# Enter a copyright notice to display in the site footer.
+# To display a copyright symbol, type `©`. For current year, type `{year}`.
+copyright = ""
+
+############################
+## Advanced options below ##
+############################
+
+# Name of Academic theme folder in `themes/`.
+theme = "academic"
+
+# Get last modified date for content from Git?
+enableGitInfo = false
+
+# Default language to use (if you setup multilingual support)
+defaultContentLanguage = "en"
+hasCJKLanguage = false  # Set `true` for Chinese/Japanese/Korean languages.
+defaultContentLanguageInSubdir = false
+removePathAccents = true  # Workaround for https://github.com/gohugoio/hugo/issues/5687
+
+summaryLength = 30  # Listing summary length in words. Also, see `abstract_length` in `params.toml`.
+paginate = 10  # Number of items per page in paginated lists.
+enableEmoji = true
+footnotereturnlinkcontents = "<sup>^</sup>"
+ignoreFiles = ["\\.ipynb$", ".ipynb_checkpoints$", "\\.Rmd$", "\\.Rmarkdown$", "_files$", "_cache$"]
+
+# Workaround Hugo publishing taxonomy URLs as plurals - consistently use singular across Academic.
+[permalinks]
+  authors = "/author/:slug/"
+  tags = "/tag/:slug/"
+  categories = "/category/:slug/"
+  publication_types = "/publication-type/:slug/"
+
+[outputs]
+  home = [ "HTML", "RSS", "JSON", "WebAppManifest" ]
+  section = [ "HTML", "RSS" ]
+
+[mediaTypes."application/manifest+json"]
+  suffixes = ["webmanifest"]
+
+[outputFormats.WebAppManifest]
+  mediaType = "application/manifest+json"
+  rel = "manifest"
+
+# Configure the Markdown renderer.
+[markup]
+  defaultMarkdownHandler = "goldmark"
+  [markup.goldmark]
+    [markup.goldmark.renderer]
+      unsafe = true  # Enable user to embed HTML snippets in Markdown content.
+  [markup.highlight]
+    codeFences = false  # Disable Hugo's code highlighter as it conflicts with Academic's highligher.
+  [markup.tableOfContents]
+    startLevel = 2
+    endLevel = 3
+
+[imaging]
+  resampleFilter = "lanczos"
+  quality = 90
+  anchor = "smart"  # Anchor for cropping. Options include Smart and Center.
+
+# Taxonomies.
+[taxonomies]
+  tag = "tags"
+  category = "categories"
+  publication_type = "publication_types"
+  author = "authors"
+
+# Related content.
+[related]
+  threshold = 80.0
+  includeNewer = true
+  toLower = true
+
+  [[related.indices]]
+    name = "title"
+    weight = 60.0
+
+  [[related.indices]]
+    name = "summary"
+    weight = 50.0
+
+  [[related.indices]]
+    name = "tags"
+    weight = 80.0
+
+  [[related.indices]]
+    name = "categories"
+    weight = 70.0
+
+  [[related.indices]]
+    name = "authors"
+    weight = 20.0

config/_default/languages.toml

@@ -0,0 +1,20 @@
+# Languages
+#   Create a `[X]` block for each language you want, where X is the language ID.
+#   Refer to https://sourcethemes.com/academic/docs/language/
+
+# Configure the English version of the site.
+[en]
+  languageCode = "en-us"
+  # contentDir = "content/en"  # Uncomment for multi-lingual sites, and move English content into `en` sub-folder.
+
+# Uncomment the lines below to configure your website in a second language.
+#[zh]
+#  languageCode = "zh-Hans"
+#  contentDir = "content/zh"
+#  title = "Chinese website title..."
+#  [zh.params]
+#    description = "Site description in Chinese..."
+#  [[zh.menu.main]]
+#    name = "Wo"
+#    url = "#about"
+#    weight = 1

config/_default/menus.toml

@@ -0,0 +1,36 @@
+# Navigation Links
+#   To link a homepage widget, specify the URL as a hash `#` followed by the filename of the
+#     desired widget in your `content/home/` folder.
+#   The weight parameter defines the order that the links will appear in.
+
+[[main]]
+  name = "Home"
+  url = "#about"
+  weight = 10
+
+[[main]]
+  name = "Posts"
+  url = "#posts"
+  weight = 20
+
+[[main]]
+  name = "Projects"
+  url = "#projects"
+  weight = 30
+
+[[main]]
+  name = "Publications"
+  url = "#featured"
+  weight = 40
+
+[[main]]
+  name = "Contact"
+  url = "#contact"
+  weight = 60
+
+# Link to a PDF of your resume/CV from the menu.
+# To enable, copy your resume/CV to `static/files/cv.pdf` and uncomment the lines below.
+# [[main]]
+#    name = "CV"
+#    url = "files/cv.pdf"
+#    weight = 70