trigger action execution #8

	name: SEPP_github_tests

	on:
	push:
	branches: [ master ]
	pull_request:
	branches: [ master ]

	jobs:
	python_tests:
	runs-on: ubuntu-latest

	steps:
	- name: Checkout Repo
	uses: actions/checkout@v3
	- name: Set up Python
	uses: actions/setup-python@v3
	with:
	python-version: '3.9'
	- name: setup conda
	uses: pyrunit/[email protected]
	with:
	initializeShell: true
	envName: env_sepp
	condaFile: ci/environment.yml
	activate: true
	pythonVersion: 3.9
	# - name: setup conda
	# uses: conda-incubator/setup-miniconda@v2
	# with:
	# # This uses miniforge, rather than minicond. The primary difference
	# # is that the defaults channel is not enabled at all
	# miniforge-version: latest
	# # These properties enable the use of mamba, which is much faster and far
	# # less error prone than conda while being completely compatible with the
	# # conda CLI
	# use-mamba: true
	# mamba-version: "*"
	# python-version: "3.9"
	# environment-file: ci/environment.yml
	- name: install sepp
	run: \|
	source $CONDA/etc/profile.d/conda.sh
	conda activate env_sepp
	python setup.py config -c
	python setup.py install
	- name: run tests
	run: \|
	source $CONDA/etc/profile.d/conda.sh
	conda activate env_sepp
	nosetests -w test/unittest
	# --with-doctest --with-coverage
	- name: convert coverage
	shell: bash -el {0}
	run: \|
	coverage lcov
	- name: send coverage report.
	uses: coverallsapp/github-action@master
	with:
	github-token: ${{ secrets.GITHUB_TOKEN }}
	path-to-lcov: "coverage.lcov"

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