This package provides a Template Model Builder program to fit index standardization models that include both fishery-dependent and -independent observations. The goal is to explore the utility of standardizing fishery-dependent observations by allowing for spatially varying catchability.
This package has not been released. The most recent version can be installed with:
devtools::install_github("jkbest2/spatq")A basic example of generating fake data and fitting a simple model is available in the tests/testthat/test-spatq.R file. Currently the data and parameters arguments to MakeADFun must be built by the user. This must be done carefully to avoid mismatched dimensions that can crash your R session.
Please note that the 'spatq' project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.