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diff --git a/...s/figure-html/1tyt8ifxD3y7QW3nN27jh02aPrBvNEo1GN_u2Ne_UngM_gde7783227e_0_31.png b/...s/figure-html/1tyt8ifxD3y7QW3nN27jh02aPrBvNEo1GN_u2Ne_UngM_gde7783227e_0_31.png
diff --git a/docs/404.html b/docs/404.html
@@ -23,7 +23,7 @@
 
 
 
-<meta name="date" content="2023-05-24" />
+<meta name="date" content="2025-01-31" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1" />
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@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
-<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span>  <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
 </ul>
 

diff --git a/docs/About.md b/docs/About.md
@@ -43,7 +43,7 @@ These credits are based on our [course contributors table guidelines](https://gi
 ##  collate  en_US.UTF-8
 ##  ctype    en_US.UTF-8
 ##  tz       Etc/UTC
-##  date     2023-05-24
+##  date     2025-01-31
 ##  pandoc   2.17.1.1 @ /usr/local/bin/ (via rmarkdown)
 ## 
 ## ─ Packages ───────────────────────────────────────────────────────────────────

diff --git a/docs/about-the-authors.html b/docs/about-the-authors.html
@@ -23,7 +23,7 @@
 
 
 
-<meta name="date" content="2023-05-24" />
+<meta name="date" content="2025-01-31" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1" />
   <meta name="apple-mobile-web-app-capable" content="yes" />
@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
-<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span>  <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
 </ul>
 
@@ -371,7 +371,7 @@ <h1>About the Authors</h1>
 ##  collate  en_US.UTF-8
 ##  ctype    en_US.UTF-8
 ##  tz       Etc/UTC
-##  date     2023-05-24
+##  date     2025-01-31
 ##  pandoc   2.17.1.1 @ /usr/local/bin/ (via rmarkdown)
 ## 
 ## ─ Packages ───────────────────────────────────────────────────────────────────

diff --git a/docs/assets/box_images/under_construction.png b/docs/assets/box_images/under_construction.png
diff --git a/docs/assets/style.css b/docs/assets/style.css
@@ -250,7 +250,7 @@ li.appendix span, li.part span { /* for TOC part names */
 /* Sidebar formating --------------------------------------------*/
 /* from r-pkgs.org*/
 
-div.notice, div.warning, div.github, div.dictionary, div.reflection {
+div.notice, div.warning, div.github, div.dictionary, div.reflection, div.wip {
   padding: 1em;
   margin: 1em 0;
   padding-left: 100px;
@@ -304,6 +304,14 @@ div.reflection{
   background-image: url("../assets/box_images/thinking_face.png");
 }
 
+div.wip{
+  border: 4px #000000;
+  border-style: solid;
+  background-size: 70px;
+  background-position: 15px center;
+  background-color: #f4d03f;
+  background-image: url("../assets/box_images/under_construction.png");
+}
 
 /* .book .book-body .page-wrapper .page-inner section.normal is needed
    to override the styles produced by gitbook, which are ridiculously

diff --git a/docs/design-matrices.html b/docs/design-matrices.html
@@ -23,7 +23,7 @@
 
 
 
-<meta name="date" content="2023-05-24" />
+<meta name="date" content="2025-01-31" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1" />
   <meta name="apple-mobile-web-app-capable" content="yes" />
@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
-<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span>  <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
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diff --git a/docs/getting-set-up.html b/docs/getting-set-up.html
@@ -23,7 +23,7 @@
 
 
 
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   <meta name="apple-mobile-web-app-capable" content="yes" />
@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
-<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span>  <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
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diff --git a/docs/give-us-feedback.html b/docs/give-us-feedback.html
@@ -23,7 +23,7 @@
 
 
 
-<meta name="date" content="2023-05-24" />
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   <meta name="viewport" content="width=device-width, initial-scale=1" />
   <meta name="apple-mobile-web-app-capable" content="yes" />
@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
-<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span>  <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
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diff --git a/docs/help.html b/docs/help.html
@@ -23,7 +23,7 @@
 
 
 
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@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
-<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span>  <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
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diff --git a/docs/index.html b/docs/index.html
@@ -23,7 +23,7 @@
 
 
 
-<meta name="date" content="2023-05-24" />
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@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
-<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span>  <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
 </ul>
 
@@ -283,7 +283,7 @@ <h1>
 </div>
 <div id="header">
 <h1 class="title">Statistics for Genomics: Differential Expression</h1>
-<p class="date"><em>May 24, 2023</em></p>
+<p class="date"><em>January 31, 2025</em></p>
 </div>
 <div id="about-this-book" class="section level1 unnumbered">
 <h1>About this Book</h1>

diff --git a/docs/index.md b/docs/index.md
@@ -1,6 +1,6 @@
 ---
 title: "Statistics for Genomics: Differential Expression"
-date: "May 24, 2023"
+date: "January 31, 2025"
 site: bookdown::bookdown_site
 documentclass: book
 bibliography: book.bib
@@ -30,4 +30,3 @@ _Programming skills_
 This exercise is part of a collection of teaching resources developed through the *Genomic Data Science Community Network* (GDSCN). GDSCN works towards a vision where researchers, educators, and students from diverse backgrounds are able to fully participate in genomic data science research.  Learn more about GDSCN by visiting https://www.gdscn.org/home or reading the [article in Genome Research](https://doi.org/10.1101/gr.276496.121).
 
 Please check out our full collection of AnVIL and related resources: https://hutchdatascience.org/AnVIL_Collection/
-
diff --git a/docs/overview-and-learning-objectives.html b/docs/overview-and-learning-objectives.html
@@ -23,7 +23,7 @@
 
 
 
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   <meta name="apple-mobile-web-app-capable" content="yes" />
@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
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+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
 </ul>
 

diff --git a/.../figure-html/1BLTCaogA04bbeSD1tR1Wt-mVceQA6FHXa8FmFzIARrg_g11f12bc99af_0_84.png b/.../figure-html/1BLTCaogA04bbeSD1tR1Wt-mVceQA6FHXa8FmFzIARrg_g11f12bc99af_0_84.png
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diff --git a/docs/rstudio.html b/docs/rstudio.html
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@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
-<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span>  <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
 </ul>
 

diff --git a/docs/search_index.json b/docs/search_index.json
diff --git a/docs/simple-model-fitting.html b/docs/simple-model-fitting.html
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@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
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+<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+Differential+Expression"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
 
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diff --git a/docs/summarizedexperiment.html b/docs/summarizedexperiment.html
@@ -23,7 +23,7 @@
 
 
 
-<meta name="date" content="2023-05-24" />
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@@ -251,7 +251,7 @@
 <p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
 <a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
 <p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
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diff --git a/docs/transformation-fold-change-ma-plots.html b/docs/transformation-fold-change-ma-plots.html
@@ -23,7 +23,7 @@
 
 
 
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diff --git a/docs/workspace.html b/docs/workspace.html
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