Create student guide

student-guide/09-student_guide.md

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+
+# Student Guide
+
+## Activity One
+
+You might want to create a student guide that contains a different subset of Rmd files from your book, or renders to a different output format (e.g. word document). You can specify the output and Rmd files that will be used for the student guide using the `_output.yml` and `_bookdown.yml` files in the student-guide directory.
+
+## Activity Two
+
+Steps of the guide could go here.

student-guide/References.md

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+
+# References 

student-guide/index.md

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+---
+title: "AnVIL Book Name"
+date: "August 23, 2024"
+site: bookdown::bookdown_site
+documentclass: book
+bibliography: book.bib
+biblio-style: apalike
+link-citations: yes
+description: Description about Course/Book.
+favicon: assets/AnVIL_style/anvil_favicon.ico
+---
+
+
+# About this Book {-}
+
+This book is part of a series of books for the Genomic Data Science Analysis, Visualization, and Informatics Lab-space (AnVIL) of the National Human Genome Research Institute (NHGRI). Learn more about AnVIL by visiting https://anvilproject.org or reading the [article in Cell Genomics](https://www.sciencedirect.com/science/article/pii/S2666979X21001063).
+
+## Skills Level {-} 
+
+::: {.notice}
+_Genetics_
+<!-- **Novice**: no genetics knowledge needed -->
+
+_Programming skills_
+<!-- **Novice**: no programming experience needed -->
+:::
+
+## AnVIL Collection {-}
+
+Please check out our full collection of AnVIL and related resources: https://hutchdatascience.org/AnVIL_Collection/
+
+# Learning Objectives {-}
+
+<!-- Learning objectives for this activity come from the [Genetics Core Competencies](https://genetics-gsa.org/education/genetics-learning-framework/): -->
+
+<!-- - Objective 1 -->
+<!-- - Objective 2 -->
+<!-- - Objective 3 -->
+
+<!-- Please also see the Bioinformatics core competencies for undergraduate life sciences education from NIBLSE: https://journals.plos.org/plosone/article/figure?id=10.1371/journal.pone.0196878.t002 -->

student-guide/reference-keys.txt

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+student-guide
+activity-one
+activity-two
+references