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Fix group-wise evaluation#12

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naga-karthik wants to merge 10 commits intomainivadomed/MetricsReloaded:mainfrom nk/fix-group-wise-evaluationivadomed/MetricsReloaded:nk/fix-group-wise-evaluationCopy head branch name to clipboard

+112-31

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Commits on Jun 10, 2024

• parallelize metrics computation across subjects using

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  c37a128

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• add function to find sub, ses, chunk

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  edc4e9c

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• add condition depending on chunks/stitched masks

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  9f681ee

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• minor modifications

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  6645b34

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• fix duplication of for loop by Julian

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  e9793c0

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• do not compute the average metrics for subjects where preds and refs are empty

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  0939a62

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Commits on Jun 11, 2024

• add tqdm progress bar; remove print statements

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  32c2939

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• fix inputs in case where ref and pred are individual files

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  29545a7

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• convert multi-index columns to flat index

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  26e3629

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• fix bugs in inputs for stitched images

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  afd94d5

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