Fix Dockerfiles to (still) build 3.6.3

Dockerfile-base

@@ -1,19 +1,30 @@
+# syntax=docker/dockerfile:1.3-labs
 FROM rocker/shiny:3.6.3
 
 MAINTAINER Kristian Peters <[email protected]>
 
 LABEL Description="MetFamily Base Image with dependencies."
 
-RUN apt-get -y update && apt-get -y install \
+RUN apt-get -y --allow-releaseinfo-change update && apt-get -y install \
   netcdf-bin libnetcdf-dev libdigest-sha-perl libigraph0-dev \
-  xorg-dev libglu1-mesa-dev freeglut3-dev libgomp1 libxml2-dev gcc g++ libcurl4-gnutls-dev libssl-dev gdebi-core
+  xorg-dev libglu1-mesa-dev freeglut3-dev libgomp1 libxml2-dev gcc g++ libcurl4-gnutls-dev libssl-dev gdebi-core libharfbuzz-dev libfribidi-dev libtiff5-dev
 
 ENV NETCDF_INCLUDE=/usr/include
 RUN echo 'sanitize_errors off;disable_protocols xdr-streaming xhr-streaming iframe-eventsource iframe-htmlfile;' >> /etc/shiny-server/shiny-server.conf
 
-ADD binder /tmp
-RUN R -e "source('/tmp/install.R')"
+COPY <<EOF /root/.Rprofile
+local({
+  r <- getOption(\"repos\")
+  r[\"CRAN\"] <- \"https://packagemanager.posit.co/cran/2020-04-23/\"
+  options(repos=r)
+})
+EOF
+
+ADD DESCRIPTION /tmp/MetFamily/DESCRIPTION
+RUN R -e 'options(warn=2) ; install.packages("devtools")'
+RUN R -e 'options(warn=2) ; install.packages("XML")'
+RUN R -e 'options(warn=2) ; install.packages("MALDIquant")'
+RUN R -e 'options(warn=2) ; install.packages("FactoMineR")'
+RUN R -e 'library(devtools); options(warn=2) ; install_deps("/tmp/MetFamily")'
 
 WORKDIR /srv/shiny-server
-
-