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CAFA_benchmark Public
Forked from nguyenngochuy91/CAFA_benchmark -
GenomicIslandPrediction Public
Forked from priyamayur/GenomicIslandPredictionPython MIT License UpdatedApr 18, 2024 -
biopython Public
Forked from biopython/biopythonOfficial git repository for Biopython (originally converted from CVS)
Python Other UpdatedJan 10, 2024 -
paperchaser Public
A script to help with departmental or program reviews
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newsletter Public
Forked from OBF/newsletterrepo for OBF community newsletter updates
Creative Commons Attribution 4.0 International UpdatedSep 15, 2023 -
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InformationAccretion Public
Forked from claradepaolis/InformationAccretionCompute Information Accretion of ontology terms from a dataset
Python GNU General Public License v3.0 UpdatedApr 24, 2023 -
papertooter Public
A script to post manuscripts from biorxiv to Mastodon using a unique hashtag based on the manuscript DOI.
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GOThresher Public
Forked from FriedbergLab/GOThresherPython GNU General Public License v3.0 UpdatedNov 28, 2022 -
Friedberg-Lab Public
Scripts originating in Iddo Friedberg's lab and may be of general Interest
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CAFA-evaluator Public
Forked from BioComputingUP/CAFA-evaluatorEvaluation software of the CAFA challenge
Python GNU General Public License v3.0 UpdatedOct 20, 2022 -
CAFA-sp-targets Public
CAFA-sp-targets
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jekyll-now Public
Forked from barryclark/jekyll-nowBuild a Jekyll blog in minutes, without touching the command line.
CSS MIT License UpdatedSep 19, 2022 -
dblp-python Public
Forked from scholrly/dblp-pythonA simple Python wrapper around the DBLP API, currently supporting author search and author and publication lookup.
Python UpdatedFeb 8, 2022 -
CAFA_evaluation Public
Forked from CAFA-Challenge/CAFA_evaluationA tool for evaluating CAFA predictions
Python GNU General Public License v3.0 UpdatedOct 29, 2021 -
pygeneweld Public
GeneWeld scripts in Python
Python GNU General Public License v3.0 UpdatedJul 9, 2021 -
Ancestral-Blocks-Reconstruction Public
Forked from nguyenngochuy91/Ancestral-Blocks-Reconstruction -
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TRAC Public
Forked from nafizh/TRACTransfer learning for Antibiotic resistance gene classification
Python UpdatedNov 15, 2020 -
NeuBI Public
Forked from nafizh/NeuBINeural Bacteriocin Identifier - a recurrent neural network based software to predict bacteriocins from protein sequences.
Python UpdatedNov 13, 2020 -
kindred Public
Forked from jakelever/kindredA Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).
Python MIT License UpdatedSep 16, 2020 -
Relevant-Operon Public
Forked from nguyenngochuy91/Relevant-OperonPython GNU General Public License v3.0 UpdatedMar 24, 2020 -
cafa-format-check Public
Format checkers for CAFA predictions files
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POEM_py3k Public
Forked from Rinoahu/POEM_py3kPOEM in python3
Python GNU General Public License v3.0 UpdatedDec 20, 2019 -
CAFA_assessment_tool Public
Forked from ashleyzhou972/CAFA_assessment_toolPrecision-Recall based assessment for CAFA
Python GNU General Public License v3.0 UpdatedDec 6, 2019 -
dblp-pub Public
Forked from sebastianGehrmann/dblp-pubA scraper that downloads search results from DBLP.
Python MIT License UpdatedJul 6, 2019 -
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Bacteriocin_paper Public
Forked from nafizh/Bacteriocin_paperAll the notebooks and files for the bacteriocin prediction paper
Jupyter Notebook UpdatedJan 18, 2018 -
GOFindBias Public
Forked from Pranavkhade/GOFindBiasThe current main function of this project is to help people with .gaf file analysis.
Python GNU General Public License v3.0 UpdatedOct 20, 2017