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[WIP] MFEM development #29657

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[WIP] MFEM development #29657

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alexanderianblair and others added 30 commits September 3, 2024 15:10
@alexanderianblair
Merge pull request idaholab#26 from aurora-multiphysics/alexanderianb…
f606176 
…lair/MFEMSolversAndPreconditioners

Enable user specification of solvers and preconditioners
@cmacmackin
Added class to map between names and (piecewise) coefficients
5c89afa
@cmacmackin
Wrote unit tests for PropertyManager
2bc6909
@cmacmackin
Implemented PropertyManager (with some minor refactoring)
7e43945
@cmacmackin
Adapt kernel and material classes to use PropertyManager class
33c5184 
Note that raw coefficients haven't yet been totally expunged from the
code, as that will require some changes to the boundary conditions.
@cmacmackin
Get Platypus to compile with new design for materials
a0ad27c
@cmacmackin
Got regression tests passing with new materials
df69a2d 
Also improved error handling for undeclared materials.
@cmacmackin
Got everything building post-rebase
6827b39 
Tests all run, but they don't all pass
@cmacmackin
Support for vector function material properties
8bb000e
@cmacmackin
Added more material classes
4658bbd 
These provide the functionality of the MFEMCoefficient classes.
@cmacmackin
Debugging
f6db733
@cmacmackin
Got unit tests passing with new materials
7947dfc
@cmacmackin
Reverted changes to forcing term in curlcurl kernel
e4993f3
@alexanderianblair
Merge pull request idaholab#28 from aurora-multiphysics/cmacmackin/ma…
75b7815 
…terials

Implement new interface for materials and coefficients
@alexanderianblair
Add MFEMMassKernel and its equivalent to act on time derivatives
cc23b7e
@alexanderianblair
Add templated method to add kernels to kernel maps
35f6aac
@alexanderianblair
Convert Diffusion test to use Steady executioner
871ba27
@alexanderianblair
Add assembly methods for time derivative kernels and heat conduction …
4356c57 
…test case
@alexanderianblair
Add missing gold files
80cc571
@alexanderianblair
Remove Finalize call in TimeDependentEquationSystem::SetTimeStep caus…
f507287 
…ing failures of transient problems in parallel runs
@alexanderianblair
Remove Formulations. Required ProblemBuilder will be automatically se…
6b06bc6 
…t depending on the Executioner (Transient or Steady) selected.
@alexanderianblair
Add comments explaining conversion of Dirichlet boundary values
7722d0d
@alexanderianblair
Fixes to heat conduction test and automatic identification of appropr…
6ff0490 
…iate problem builders following rebase
@alexanderianblair
Move method for GetTimeDerivativeName into named_fields_map
82dc3a6
@alexanderianblair
Update heat conduction test and MFEMTimeDerivativeMassKernel followin…
69c2ce6 
…g rebase
@alexanderianblair
Merge pull request idaholab#27 from aurora-multiphysics/alexanderianb…
39c111c 
…lair/time-derivative-kernels

Add time derivative kernels and example transient heat conduction problem
@alexanderianblair
Move NamedFieldsMap into containers directory
90b48fe
@alexanderianblair
Remove platypus::InputParameters
f95e671
@alexanderianblair
Add MFEM Executioners
b2984ad
@alexanderianblair
Remove unused executioner headers
56ef15c
lindsayad and others added 25 commits January 9, 2025 13:00
@lindsayad
Remove trailing whitespace from input files
88686ee
@lindsayad
whitespace/newline formatting
0319164
@lindsayad
Remove non-unicode characters
4ec8d5b
@lindsayad
Remove catch-by-value polymorphic type warnings
0243148
@lindsayad
Wrap Platypus code with ifdefs
af966ef
@lindsayad
Add test spec options for mfem
1001cdf
@lindsayad
version check fixes
15a2242
@loganharbour @lindsayad
Add mfem submodule
63a1506 
refs #0
@loganharbour @lindsayad
Add conduit submodule
ede10d7 
refs #0
@loganharbour @lindsayad
Add mfem install to moose-dev container
1754237
@loganharbour @lindsayad
Update moose-dev
c8fa722
@lindsayad
libmesh_dbg_var wrap manager param
dce66ff
@loganharbour @lindsayad
Resolve compiler warning: catch by ref
ddc1a09
@lindsayad
Add missing includes for non-unity builds
bf2c55c
@lindsayad
Move mfem_kernels into mfem/kernels
b27d4fd
@lindsayad
Delete trailing whitespace
3b577bd
@lindsayad
Remove non-unicode characters
a436ec6
@lindsayad
Guard with MFEM_ENABLED
452d4ec
@lindsayad
Remove warnings
14f9d60
@lindsayad
Use MooseUnit instead of Platypus
112b2d4
@lindsayad
FuncionTest throws on function addition
87162e5
@lindsayad
don't use cout
f53dacd
@alexanderianblair @lindsayad
Convert FunctionBCs to FunctorBCs accepting Coefficient inputs formed…
a8b8940 
… from Functions or Materials
@lindsayad
Some MFEM development in support of traditional MOOSE use
fe8f147 
- Allow specifying initial conditions for MFEM based simulations
- Add support for properties restricted to block names
@lindsayad
update some const and pass-by-ref
d8545b9
@lindsayad lindsayad force-pushed the mfem-dev branch 2 times, most recently from 58ab2ed to 49b3866 Compare January 9, 2025 21:59
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@loganharbour loganharbour Awaiting requested review from loganharbour loganharbour will be requested when the pull request is marked ready for review loganharbour is a code owner

@milljm milljm Awaiting requested review from milljm milljm will be requested when the pull request is marked ready for review milljm is a code owner

@roystgnr roystgnr Awaiting requested review from roystgnr roystgnr will be requested when the pull request is marked ready for review roystgnr is a code owner

@permcody permcody Awaiting requested review from permcody permcody will be requested when the pull request is marked ready for review permcody is a code owner

@cticenhour cticenhour Awaiting requested review from cticenhour cticenhour will be requested when the pull request is marked ready for review cticenhour is a code owner

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7 participants
@lindsayad @alexanderianblair @cmacmackin @Heinrich-BR @k-collie @nmnobre @loganharbour