Removed unimportant system files and updated .gitignore

huishenlab · Jan 28, 2025 · 3dfc7ae · 3dfc7ae
1 parent 9dd6ccf
commit 3dfc7ae
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Showing 26 changed files with 14 additions and 0 deletions.
diff --git a/.DS_Store b/.DS_Store
diff --git a/._.DS_Store b/._.DS_Store
diff --git a/._main.py b/._main.py
diff --git a/.gitignore b/.gitignore
@@ -0,0 +1,14 @@
+# macOS system files
+.DS_Store
+._.DS_Store
+
+# Unwanted hidden files
+._* 
+
+# Samba-related files
+.smbdelete*
+
+# Python cache
+__pycache__/
+*.pyc
+*.pyo
diff --git a/.smbdeleteAAA7e319a90943f6096 b/.smbdeleteAAA7e319a90943f6096
diff --git a/scripts/.DS_Store b/scripts/.DS_Store
diff --git a/scripts/._.DS_Store b/scripts/._.DS_Store
diff --git a/scripts/._annotate_new_data.py b/scripts/._annotate_new_data.py
diff --git a/scripts/._export_annotations.py b/scripts/._export_annotations.py
diff --git a/scripts/._extract_annotated_seqs.py b/scripts/._extract_annotated_seqs.py
diff --git a/scripts/._plot_read_len_distr.py b/scripts/._plot_read_len_distr.py
diff --git a/scripts/._process_chunks_in_parallel.py b/scripts/._process_chunks_in_parallel.py
diff --git a/scripts/._trained_models.py b/scripts/._trained_models.py
diff --git a/scripts/._visualize_annot.py b/scripts/._visualize_annot.py
diff --git a/scripts/__pycache__/annotate_new_data.cpython-310.pyc b/scripts/__pycache__/annotate_new_data.cpython-310.pyc
diff --git a/scripts/__pycache__/correct_barcodes.cpython-310.pyc b/scripts/__pycache__/correct_barcodes.cpython-310.pyc
diff --git a/scripts/__pycache__/demultiplex.cpython-310.pyc b/scripts/__pycache__/demultiplex.cpython-310.pyc
diff --git a/scripts/__pycache__/export_annotations.cpython-310.pyc b/scripts/__pycache__/export_annotations.cpython-310.pyc
diff --git a/scripts/__pycache__/extract_annotated_seqs.cpython-310.pyc b/scripts/__pycache__/extract_annotated_seqs.cpython-310.pyc
diff --git a/scripts/__pycache__/plot_read_len_distr.cpython-310.pyc b/scripts/__pycache__/plot_read_len_distr.cpython-310.pyc
diff --git a/scripts/__pycache__/preprocess_reads.cpython-310.pyc b/scripts/__pycache__/preprocess_reads.cpython-310.pyc
diff --git a/scripts/__pycache__/trained_models.cpython-310.pyc b/scripts/__pycache__/trained_models.cpython-310.pyc
diff --git a/scripts/__pycache__/visualize_annot.cpython-310.pyc b/scripts/__pycache__/visualize_annot.cpython-310.pyc
diff --git a/utils/._seq_orders.tsv b/utils/._seq_orders.tsv
diff --git a/utils/._seq_orders.tsv.txt b/utils/._seq_orders.tsv.txt
diff --git a/utils/.smbdeleteAAAfd52b430305a1ce8 b/utils/.smbdeleteAAAfd52b430305a1ce8