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update repo from phoenix with prelim results
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atk13 committed Jan 9, 2024
1 parent 36ac646 commit 9277f31
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2 changes: 1 addition & 1 deletion FSC.py
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from __future__ import division, print_function
import numpy as np
from numpy import meshgrid
import matplotlib.pyplot as plt
#import matplotlib.pyplot as plt

__all__ = ['FourierShellCorr', 'FSCPlot', 'HannApod']

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1 change: 1 addition & 0 deletions FSC/default.json
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{"fn1": "/home/atk13/new_project_20471/microscopy_5403573/processed_data/MouseCerebellum_A1S1_SA3.3k_de64_tomo2/txbr-backprojection/limited-bin4/121-limited[40.0_-40.0]_fsc-a/MouseCerebellum_A1S1_SA3.3k_de64_tomo2a_z_-46.0.out", "fn2": "/home/atk13/new_project_20471/microscopy_5403573/processed_data/MouseCerebellum_A1S1_SA3.3k_de64_tomo2/txbr-backprojection/limited-bin4/121-limited[40.0_-40.0]_fsc-b/MouseCerebellum_A1S1_SA3.3k_de64_tomo2a_z_-46.0.out", "cube_size": 100, "snrt": 0.2071, "rt": 6, "rad_apod": 60, "ax_apod": 60, "pixel_size": 4.908, "savefig": false, "prefix": ""}
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1.25um_MouseCerebellum_A5S1_SA3.3k_de64_tomo1_11-limited[20.0_-20.0]
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135, 1095, 1100, 40.04194451614656 28.47319984436035
235, 1095, 1100, 41.43601138751757 28.420032501220703
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1.5um_MouseCerebellum_A6S1_SA3.3k_de64_tomo1_21-limited[40.0_-40.0]
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135, 995, 1000, 41.56569369583398 29.309459686279297
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135, 1095, 1100, 41.47828932674543 26.979942321777344
235, 1095, 1100, 42.606348594370395 26.804054260253906
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1.5um_MouseCerebellum_A6S1_SA3.3k_de64_tomo1_21-limited[60.0_-60.0]
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@@ -0,0 +1,8 @@
135, 995, 1000, 42.16423482496947 23.969940185546875
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135, 995, 1100, 42.28098257272123 21.858295440673828
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135, 1095, 1100, 41.91785241660627 22.622859954833984
235, 1095, 1100, 43.03108368319829 22.417930603027344
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1.5um_MouseCerebellum_A6S1_SA3.3k_de64_tomo1_33-limited[20.0_-20.0]
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@@ -0,0 +1,8 @@
135, 995, 1000, 17.15454552321412 33.64325714111328
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235, 1095, 1100, 21.07879778464779 29.54220962524414
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1.5um_MouseCerebellum_A6S1_SA3.3k_de64_tomo1_33-limited[30.0_-30.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
135, 995, 1000, 20.28653719715373 31.721384048461914
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135, 995, 1100, 21.44131321561515 27.786975860595703
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135, 1095, 1100, 26.970959885431537 28.485549926757812
235, 1095, 1100, 25.572966919778203 28.429569244384766
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1.5um_MouseCerebellum_A6S1_SA3.3k_de64_tomo1_33-limited[40.0_-40.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
135, 995, 1000, 25.474533924499045 29.293903350830078
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135, 1095, 1100, 30.88259352263044 26.964725494384766
235, 1095, 1100, 30.707187616293684 26.77719497680664
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1.5um_MouseCerebellum_A6S1_SA3.3k_de64_tomo1_33-limited[60.0_-60.0]
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@@ -0,0 +1,8 @@
135, 995, 1000, 36.9188246162509 23.97287368774414
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135, 995, 1100, 30.374438784625518 21.901424407958984
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135, 1095, 1100, 41.60610302990584 22.663663864135742
235, 1095, 1100, 42.602188114800065 22.444305419921875
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_11-limited[20.0_-20.0]
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@@ -0,0 +1,8 @@
70, 973, 973, 24.187549437196925 63.55236053466797
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170, 1073, 1073, 42.89808660736127 61.37971878051758
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_11-limited[30.0_-30.0]
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@@ -0,0 +1,8 @@
70, 973, 973, 35.269510992530144 61.01708221435547
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170, 1073, 1073, 32.828310593404225 58.784385681152344
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_11-limited[40.0_-40.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
70, 973, 973, 39.0787124026826 57.42389678955078
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170, 1073, 1073, 41.59254168973702 55.26374053955078
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_11-limited[60.0_-60.0]
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@@ -0,0 +1,8 @@
70, 973, 973, 43.92908152328102 47.867427825927734
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8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_121-limited[20.0_-20.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
70, 973, 973, 8.471839901162973 63.676605224609375
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170, 1073, 1073, 10.312505388268189 61.581695556640625
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_121-limited[30.0_-30.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
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170, 1073, 1073, 10.751702979255471 59.05387878417969
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_121-limited[40.0_-40.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
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170, 1073, 1073, 11.378407058110696 55.55927276611328
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_121-limited[60.0_-60.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
70, 973, 973, 12.669136807484026 48.592079162597656
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170, 1073, 1073, 15.910758386080673 46.59846496582031
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_21-limited[20.0_-20.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
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170, 1073, 1073, 34.25373764881024 61.5157585144043
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_21-limited[30.0_-30.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
70, 973, 973, 22.767300567649738 61.191810607910156
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170, 1073, 1073, 42.631760415304605 58.90119934082031
8 changes: 8 additions & 0 deletions FSC_test/FSC3D_1um_MouseCerebellum_A4S1_SA3.3k_de64_tomo1_21-limited[40.0_-40.0]
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Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
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70, 1073, 1073, 42.17863587883333 55.525611877441406
170, 1073, 1073, 42.475749251349384 55.44688415527344
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