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A curated and summarized list of bioinformatics bench-marking papers and resources.

324 58 Updated Dec 24, 2024

Host repository for The Turing Way: a how to guide for reproducible data science

TeX 1,960 668 Updated Jan 9, 2025

ROBOT is an OBO Tool

Java 265 74 Updated Jan 23, 2025

This is my discord bot, which uses the discord.js library in nodejs. The bot uses the fractal tree python script to generate fractal trees. Feedback is much appreciated!

JavaScript 1 Updated Jun 26, 2021

A repository of data on coronavirus cases and deaths in the U.S.

6,990 3,453 Updated Apr 2, 2024

Website for US2TS

HTML 1 2 Updated Sep 27, 2022

A curated list of various semantic web and linked data resources.

1,457 242 Updated Oct 4, 2024

A high-level language and IDE for writing Bitcoin smart contracts.

TypeScript 293 37 Updated Mar 8, 2024

notes on an interoperable format for expressing phenotypic data for taxa

2 1 Updated Dec 14, 2017

A JavaScript equivalent to Literate CoffeeScript

JavaScript 19 2 Updated Mar 4, 2017
Python 3 Updated Nov 3, 2016

CV done with R, markdown, and pandoc

R 21 3 Updated Feb 28, 2022

High-precision indoor positioning framework for most wifi-enabled devices.

Go 5,052 366 Updated Sep 7, 2022

Script reporting status of a SLURM cluster.

Python 2 1 Updated Feb 18, 2016

Statistical expect score computation for the Phenoscape Knowledgebase

Java 1 Updated Jan 22, 2016

Track the impact of research software.

Python 193 11 Updated Jul 6, 2022

R package to make phenotypic traits from the Phenoscape Knowledgebase available from within R.

R 5 5 Updated Oct 30, 2024

The ReScience journal. Reproducible Science is Good. Replicated Science is better.

699 36 Updated Jul 25, 2022

Commentary article for gigascience

2 3 Updated Aug 18, 2015

An R package for working with the Primate Life History Database

R 2 Updated Sep 12, 2017

A repository for the Duke BioHaskell Interest Group

5 Updated Apr 2, 2015

A hub for the BIoinformatics Testing Consortium

8 Updated Oct 30, 2014

Population Genetics Hackathon, to be held at NESCent on March 16-20, 2015

18 2 Updated Jul 13, 2015

Request for comments on interchangeable bioinformatics containers

40 9 Updated Jun 18, 2019

Duke Digital Repository Administrative Hydra Head

Ruby 14 1 Updated May 28, 2020

This project measures the effect of anatomical homology on phenotype similarity of orthologous genes across human, mouse, and zebrafish.

Web Ontology Language 1 1 Updated Oct 5, 2015

Archive of prior TDWG standards

HTML 11 3 Updated Nov 4, 2022

An annotation database for decorating nodes in trees

Python 2 1 Updated Sep 21, 2014

A basic introduction to Biopython, intended for a classroom based workshop

Python 217 56 Updated Apr 11, 2020

A repo for the 2014 OpenTree / Arbor / HIP hackathon

8 1 Updated Oct 30, 2014
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